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    UTP11 rRNA-processing protein UTP11 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853762, updated on 9-Dec-2024

    Summary

    Official Symbol
    UTP11
    Official Full Name
    rRNA-processing protein UTP11
    Primary source
    SGD:S000001582
    Locus tag
    YKL099C
    See related
    AllianceGenome:SGD:S000001582; FungiDB:YKL099C; VEuPathDB:YKL099C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); and endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Located in nucleolus. Part of small-subunit processome. Orthologous to human UTP11 (UTP11 small subunit processome component). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See UTP11 in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    1
    Sequence:
    Chromosome: XI; NC_001143.9 (255720..256472, complement)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene protein kinase HSL1 Neighboring gene aspartic endopeptidase Neighboring gene Mtc2p Neighboring gene uncharacterized protein

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of small-subunit processome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    rRNA-processing protein UTP11
    NP_012823.2
    • Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      255720..256472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179665.1NP_012823.2  TPA: rRNA-processing protein UTP11 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012823.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A6ZZL7, B5VM59, D6VXI8, P34247
      UniProtKB/TrEMBL
      C7GVL1, C8ZC76, G2WHT4, N1P278
      Conserved Domains (1) summary
      COG5223
      Location:1250
      COG5223; Uncharacterized conserved protein [Function unknown]