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    Gm19345 predicted gene, 19345 [ Mus musculus (house mouse) ]

    Gene ID: 100502736, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Gm19345provided by MGI
    Official Full Name
    predicted gene, 19345provided by MGI
    Primary source
    MGI:MGI:5011530
    See related
    Ensembl:ENSMUSG00000092216 AllianceGenome:MGI:5011530
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in CNS E18 (RPKM 8.2), spleen adult (RPKM 8.1) and 11 other tissues See more
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    Genomic context

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    See Gm19345 in Genome Data Viewer
    Location:
    7 A3; 7 9.95 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (19585928..19592280)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (19852003..19858355)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_18223 Neighboring gene STARR-positive B cell enhancer ABC_E1721 Neighboring gene B cell leukemia/lymphoma 3 Neighboring gene predicted gene 16174 Neighboring gene predicted gene, 34891 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:20426963-20427193 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:20429933-20430166 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:20430230-20430572 Neighboring gene STARR-positive B cell enhancer ABC_E6521 Neighboring gene CEA cell adhesion molecule 16 Neighboring gene STARR-positive B cell enhancer ABC_E11343 Neighboring gene STARR-seq mESC enhancer starr_18229 Neighboring gene CEA cell adhesion molecule 19 Neighboring gene poliovirus receptor Neighboring gene ribosomal protein L14 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    uncharacterized protein LOC100502736

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001270489.1 → NP_001257418.1  uncharacterized protein LOC100502736

      Status: VALIDATED

      Source sequence(s)
      AK043814, AW456762, BI133264
      Consensus CDS
      CCDS57502.1
      UniProtKB/TrEMBL
      G3UYD9
      Related
      ENSMUSP00000134044.2, ENSMUST00000172815.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      19585928..19592280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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