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    Tmsb4x thymosin, beta 4, X chromosome [ Mus musculus (house mouse) ]

    Gene ID: 19241, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmsb4xprovided by MGI
    Official Full Name
    thymosin, beta 4, X chromosomeprovided by MGI
    Primary source
    MGI:MGI:99510
    See related
    Ensembl:ENSMUSG00000049775 AllianceGenome:MGI:99510
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tb4; Ptmb4; Tbeta4
    Summary
    Predicted to enable actin monomer binding activity; enzyme binding activity; and protein sequestering activity. Acts upstream of or within regulation of cell migration. Located in cytosol and nucleus. Is expressed in several structures, including central nervous system; embryo mesenchyme; eye; heart and pericardium; and tooth. Orthologous to several human genes including TMSB4X (thymosin beta 4 X-linked). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in bladder adult (RPKM 1135.4), CNS E18 (RPKM 702.7) and 18 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Tmsb4x in Genome Data Viewer
    Location:
    X F5; X 78.28 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (165990089..165996475, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (167207093..167213479, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chrX:163526851-163527151 Neighboring gene predicted gene 15232 Neighboring gene STARR-seq mESC enhancer starr_48264 Neighboring gene STARR-seq mESC enhancer starr_48265 Neighboring gene predicted gene, 39549 Neighboring gene STARR-seq mESC enhancer starr_48267 Neighboring gene STARR-seq mESC enhancer starr_48268 Neighboring gene STARR-seq mESC enhancer starr_48270 Neighboring gene toll-like receptor 8 Neighboring gene STARR-positive B cell enhancer mm9_chrX:163766615-163766916 Neighboring gene toll-like receptor 7

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Gene trapped (1) 
    • Targeted (5)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables actin monomer binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables actin monomer binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin monomer binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein sequestering activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein sequestering activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell cycle G1/S phase transition ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of hematopoietic stem cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of ATP biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of blood vessel endothelial cell migration IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of endothelial cell chemotaxis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of smooth muscle cell differentiation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of smooth muscle cell migration TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in regulation of cell migration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within regulation of cell migration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in sequestering of actin monomers IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sequestering of actin monomers IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in tumor necrosis factor-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    thymosin beta-4
    Names
    prothymosin beta 4
    t beta 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021278.2NP_067253.1  thymosin beta-4

      See identical proteins and their annotated locations for NP_067253.1

      Status: VALIDATED

      Source sequence(s)
      AK169108, BQ127748
      Consensus CDS
      CCDS30529.1
      UniProtKB/Swiss-Prot
      P20065
      UniProtKB/TrEMBL
      Q6ZWX2
      Related
      ENSMUSP00000107795.4, ENSMUST00000112172.4
      Conserved Domains (1) summary
      pfam01290
      Location:341
      Thymosin; Thymosin beta-4 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      165990089..165996475 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006528759.1XP_006528822.1  thymosin beta-4 isoform X1

      See identical proteins and their annotated locations for XP_006528822.1

      UniProtKB/Swiss-Prot
      P20065
      UniProtKB/TrEMBL
      Q6ZWX2
      Conserved Domains (1) summary
      pfam01290
      Location:341
      Thymosin; Thymosin beta-4 family