U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Defb35 defensin beta 35 [ Mus musculus (house mouse) ]

    Gene ID: 246084, updated on 9-Dec-2024

    Summary

    Official Symbol
    Defb35provided by MGI
    Official Full Name
    defensin beta 35provided by MGI
    Primary source
    MGI:MGI:2179204
    See related
    Ensembl:ENSMUSG00000058052 AllianceGenome:MGI:2179204
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BD-35
    Summary
    Predicted to be involved in defense response to bacterium and innate immune response. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 6.8) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Defb35 in Genome Data Viewer
    Location:
    8 A2; 8 10.66 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (22428368..22430894)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (21938352..21940878)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene defensin beta 11 Neighboring gene predicted gene, 36879 Neighboring gene defensin beta 15 Neighboring gene defensin beta 13 Neighboring gene predicted gene, 29821 Neighboring gene STARR-seq mESC enhancer starr_20895 Neighboring gene family with sequence similarity 90, member A1A

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_139224.1NP_631970.1  beta-defensin 35 precursor

      See identical proteins and their annotated locations for NP_631970.1

      Status: VALIDATED

      Source sequence(s)
      AJ437650
      Consensus CDS
      CCDS52516.1
      UniProtKB/Swiss-Prot
      Q8R2I3
      Related
      ENSMUSP00000076067.3, ENSMUST00000076786.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      22428368..22430894
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)