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    Dhcr24 24-dehydrocholesterol reductase [ Mus musculus (house mouse) ]

    Gene ID: 74754, updated on 27-Nov-2024

    Summary

    Official Symbol
    Dhcr24provided by MGI
    Official Full Name
    24-dehydrocholesterol reductaseprovided by MGI
    Primary source
    MGI:MGI:1922004
    See related
    Ensembl:ENSMUSG00000034926 AllianceGenome:MGI:1922004
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mKIAA0018; 2310076D10Rik; 5830417J06Rik
    Summary
    Predicted to enable enzyme binding activity; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; and peptide antigen binding activity. Involved in cholesterol biosynthetic process and skin development. Acts upstream of or within several processes, including amyloid precursor protein catabolic process; male genitalia development; and plasminogen activation. Predicted to be located in endoplasmic reticulum and nucleus. Predicted to be active in cytoplasm. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; peripheral nervous system ganglion; and sensory organ. Human ortholog(s) of this gene implicated in lipid metabolism disorder. Orthologous to human DHCR24 (24-dehydrocholesterol reductase). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in liver adult (RPKM 318.3), adrenal adult (RPKM 181.1) and 23 other tissues See more
    Orthologs
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    Genomic context

    See Dhcr24 in Genome Data Viewer
    Location:
    4 C7; 4 49.67 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (106418279..106446310)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (106561038..106589113)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 54247 Neighboring gene RIKEN cDNA 2700068H02 gene Neighboring gene STARR-positive B cell enhancer ABC_E10243 Neighboring gene STARR-seq mESC enhancer starr_10995 Neighboring gene STARR-seq mESC enhancer starr_10996 Neighboring gene ciliary microtubule associated protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:106287642-106287893 Neighboring gene STARR-positive B cell enhancer ABC_E10244 Neighboring gene tetratricopeptide repeat domain 22

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (3)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables delta24(24-1) sterol reductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables delta24(24-1) sterol reductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables delta24(24-1) sterol reductase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables delta24-sterol reductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables delta24-sterol reductase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables peptide antigen binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptide antigen binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in Ras protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in Ras protein signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within amyloid precursor protein catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cholesterol biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cholesterol biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cholesterol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in cholesterol biosynthetic process via desmosterol IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cholesterol biosynthetic process via desmosterol ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cholesterol metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within male genitalia development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within membrane organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in negative regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within plasminogen activation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within protein localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to hormone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in skin development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in steroid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in steroid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within sterol metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within tissue development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in tissue development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in tissue development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    delta(24)-sterol reductase
    Names
    3-beta-hydroxysterol delta-24-reductase
    seladin-1
    NP_444502.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053272.3NP_444502.2  delta(24)-sterol reductase precursor

      See identical proteins and their annotated locations for NP_444502.2

      Status: VALIDATED

      Source sequence(s)
      AL929585, BX511043
      Consensus CDS
      CCDS18420.1
      UniProtKB/Swiss-Prot
      Q6ZQK9, Q8VCH6, Q91ZD0, Q9CU63
      Related
      ENSMUSP00000038063.4, ENSMUST00000047973.4
      Conserved Domains (2) summary
      COG0277
      Location:114270
      GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
      pfam01565
      Location:114203
      FAD_binding_4; FAD binding domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      106418279..106446310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)