Lce3c late cornified envelope 3C [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Lce3cprovided by MGI
Official Full Name: late cornified envelope 3Cprovided by MGI
Primary source: MGI:MGI:2135932
See related: Ensembl:ENSMUSG00000045475 AllianceGenome:MGI:2135932
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Eig3; Sprrl1; 2300007B01Rik
Summary: Is expressed in skin; tongue; and tongue epithelium. Orthologous to several human genes including LCE3B (late cornified envelope 3B) and LCE3C (late cornified envelope 3C). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Restricted expression toward stomach adult (RPKM 197.7) See more
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Genomic context

Location:: 3 F1; 3 40.14 cM

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	3	NC_000069.7 (92851793..92853038)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	3	NC_000069.6 (92944486..92945730)

Chromosome 3 - NC_000069.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)
Targeted (1)

General gene information

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Markers

NoName (e-PCR)
- UniSTS:492919

AV076207 (e-PCR)
- UniSTS:165271

47.MMHAP4FLH5.seq (e-PCR)
- UniSTS:159146

UniSTS:483006 (e-PCR)
- UniSTS:483006

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: late cornified envelope 3C

Names: small proline rich-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.