Glt28d2 glycosyltransferase 28 domain containing 2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Glt28d2provided by MGI
Official Full Name: glycosyltransferase 28 domain containing 2provided by MGI
Primary source: MGI:MGI:2443773
See related: Ensembl:ENSMUSG00000031286 AllianceGenome:MGI:2443773
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Glt28d1l; 4732486J07Rik
Summary: Is expressed in bladder; cerebral cortex subventricular zone; cerebral cortex ventricular layer; and urinary system. [provided by Alliance of Genome Resources, Nov 2024]
Expression: Broad expression in mammary gland adult (RPKM 3.0), duodenum adult (RPKM 2.7) and 20 other tissues See more
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Genomic context

Location:: 3 F1; 3 37.83 cM

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	3	NC_000069.7 (85777153..85794825, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	3	NC_000069.6 (85869846..85887518, complement)

Chromosome 3 - NC_000069.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

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Markers

NoName (e-PCR)
- UniSTS:493387

Glt28d2 (e-PCR), detects polymorphism
- UniSTS:546796

General protein information

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Preferred Names: glycosyltransferase 28 domain containing 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_177130.3 → NP_796104.2 glycosyltransferase 28 domain containing 1-like

See identical proteins and their annotated locations for NP_796104.2

Status: VALIDATED

Source sequence(s)

AK030588, BB008997, BB622267

Consensus CDS

CCDS17443.1

UniProtKB/TrEMBL

Q0VD95, Q8BML3, Q8C132

Related

ENSMUSP00000033643.6, ENSMUST00000033643.6

Conserved Domains (1) summary

cl10013
Location:4 → 120

Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...