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    LOC105371307 uncharacterized LOC105371307 [ Homo sapiens (human) ]

    Gene ID: 105371307, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105371307
    Gene description
    uncharacterized LOC105371307
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105371307 in Genome Data Viewer
    Location:
    16q21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (63056777..63098697, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (68845974..68886600, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371306 Neighboring gene uncharacterized LOC102723560 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr16:62887250-62888449 Neighboring gene DPPA3 pseudogene 11 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10936 Neighboring gene Sharpr-MPRA regulatory region 101 Neighboring gene uncharacterized LOC105371308 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:63153709-63154210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:63154211-63154710 Neighboring gene UBE2F pseudogene 2 Neighboring gene ribosomal protein S15a pseudogene 34

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      63056777..63098697 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_933665.3 RNA Sequence

    2. XR_007065219.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      68845974..68886600 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007086548.1 RNA Sequence

    2. XR_007086547.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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