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    TBC1D29P TBC1 domain family member 29, pseudogene [ Homo sapiens (human) ]

    Gene ID: 26083, updated on 10-Dec-2024

    Summary

    Official Symbol
    TBC1D29Pprovided by HGNC
    Official Full Name
    TBC1 domain family member 29, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:24509
    See related
    Ensembl:ENSG00000290404 AllianceGenome:HGNC:24509
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TBC1D29
    Expression
    Restricted expression toward testis (RPKM 3.5) See more
    Orthologs
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    Genomic context

    See TBC1D29P in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (30559566..30563493)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (31504207..31508135)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (28886584..28890511)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene arachidonate 12-lipoxygenase pseudogene 1 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:28863435-28863984 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28868427-28868928 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28878036-28878566 Neighboring gene TBC1 domain family member 3 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28892925-28893520 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28893521-28894115 Neighboring gene SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28896451-28897128 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28897129-28897806 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:28898485-28899162 Neighboring gene uncharacterized LOC101927093 Neighboring gene keratin 17 pseudogene 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General gene information

    Other Names

    • TBC1 domain family, member 29
    • putative TBC1 domain family member 29

    Clone Names

    • DKFZp434O047

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_172920.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC011840
      Related
      ENST00000649411.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      30559566..30563493
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      31504207..31508135
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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