NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001256910.2 → NP_001243839.1 nucleolar RNA helicase 2 isoform 2
See identical proteins and their annotated locations for NP_001243839.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5'UTR and has multiple coding region differences, compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (2) with a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AA446317, AL359844
- Consensus CDS
-
CCDS73144.1
- UniProtKB/TrEMBL
-
A0A8I5KND9
- Related
- ENSP00000480334.1, ENST00000620315.2
- Conserved Domains (5) summary
-
- PTZ00424
Location:100 → 486
- PTZ00424; helicase 45; Provisional
- cd00079
Location:343 → 470
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- cd00268
Location:120 → 327
- DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
- cd12936
Location:549 → 641
- GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
- cl17173
Location:650 → 703
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
-
NM_001410932.1 → NP_001397861.1 nucleolar RNA helicase 2 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL359844
- Consensus CDS
-
CCDS91249.1
- UniProtKB/TrEMBL
- A0A8I5KNP3, A0A8I5KYZ4
- Related
- ENSP00000510328.1, ENST00000685106.1
-
NM_004728.4 → NP_004719.2 nucleolar RNA helicase 2 isoform 1
See identical proteins and their annotated locations for NP_004719.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AA446317, AL359844, BC008071, DW408689
- Consensus CDS
-
CCDS31211.1
- UniProtKB/Swiss-Prot
- B2RDL0, Q13436, Q5VX41, Q68D35, Q9NR30
- UniProtKB/TrEMBL
-
A0A8I5KNP3
- Related
- ENSP00000346120.4, ENST00000354185.9
- Conserved Domains (3) summary
-
- COG0513
Location:178 → 587
- SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
- cd12936
Location:617 → 709
- GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
- cl17173
Location:718 → 771
- AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
68956170..68985068
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
69825602..69854499
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)