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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_032898.1 RefSeqGene
- Range
-
5178..26768
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_637
mRNA and Protein(s)
-
NM_001005376.3 → NP_001005376.1 urokinase plasminogen activator surface receptor isoform 2 precursor
See identical proteins and their annotated locations for NP_001005376.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region, compared to variant 1. Variant 2 encodes the shortest isoform (2), also called suPLAUR, which is the soluble form of this protein. Isoform 2 lacks one of three LU (Ly-6 antigen/uPA receptor-like) domains, compared to isoform 1.
- Source sequence(s)
-
AI801128, AI912302, CA495321, X74039
- Consensus CDS
-
CCDS33041.1
- UniProtKB/TrEMBL
-
Q9UPI5
- Related
- ENSP00000342049.2, ENST00000339082.7
- Conserved Domains (2) summary
-
- smart00134
Location:115 → 202
- LU; Ly-6 antigen / uPA receptor -like domain
- cl10471
Location:23 → 101
- LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
-
NM_001005377.3 → NP_001005377.1 urokinase plasminogen activator surface receptor isoform 3 precursor
See identical proteins and their annotated locations for NP_001005377.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks one exon in the coding region and encodes an isoleucine rather than a valine following the splice site, compared to variant 1. Variant 3 encodes isoform 3 which is longer and lacks one of three LU (Ly-6 antigen/uPA receptor-like) domains, compared to isoform 2.
- Source sequence(s)
-
CD370232, U08839
- Consensus CDS
-
CCDS33042.1
- UniProtKB/Swiss-Prot
-
Q03405
- Related
- ENSP00000221264.3, ENST00000221264.8
- Conserved Domains (2) summary
-
- smart00134
Location:23 → 101
- LU; Ly-6 antigen / uPA receptor -like domain
- cd00117
Location:170 → 251
- LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
-
NM_001301037.2 → NP_001287966.1 urokinase plasminogen activator surface receptor isoform 4 precursor
See identical proteins and their annotated locations for NP_001287966.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. It encodes isoform 4, which lacks an internal in-frame segment and is shorter, compared to isoform 1.
- Source sequence(s)
-
AK290774, BY996586, CA495321, CF126152
- Consensus CDS
-
CCDS74386.1
- UniProtKB/TrEMBL
-
M0R1I2
- Related
- ENSP00000471881.1, ENST00000601723.5
- Conserved Domains (2) summary
-
- smart00134
Location:115 → 202
- LU; Ly-6 antigen / uPA receptor -like domain
- pfam00021
Location:25 → 99
- UPAR_LY6; u-PAR/Ly-6 domain
-
NM_002659.4 → NP_002650.1 urokinase plasminogen activator surface receptor isoform 1 precursor
See identical proteins and their annotated locations for NP_002650.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1) which contains three LU (Ly-6 antigen/uPA receptor-like) domains.
- Source sequence(s)
-
BC002788, CD370232
- Consensus CDS
-
CCDS12628.1
- UniProtKB/Swiss-Prot
- A8K409, Q03405, Q12876, Q15845, Q16887, Q6IB52, Q9BWT0, Q9NYC8, Q9UD69, Q9UEA6, Q9UM92, Q9UMV0
- Related
- ENSP00000339328.3, ENST00000340093.8
- Conserved Domains (3) summary
-
- smart00134
Location:115 → 202
- LU; Ly-6 antigen / uPA receptor -like domain
- cd00117
Location:215 → 296
- LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
- cl10471
Location:25 → 99
- LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
43646095..43670169 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047438937.1 → XP_047294893.1 urokinase plasminogen activator surface receptor isoform X14
-
XM_047438933.1 → XP_047294889.1 urokinase plasminogen activator surface receptor isoform X10
-
XM_047438936.1 → XP_047294892.1 urokinase plasminogen activator surface receptor isoform X13
- UniProtKB/TrEMBL
-
Q9UPI5
-
XM_047438927.1 → XP_047294883.1 urokinase plasminogen activator surface receptor isoform X4
- Conserved Domains (2) summary
-
- smart00134
Location:67 → 154
- LU; Ly-6 antigen / uPA receptor -like domain
- cd00117
Location:167 → 248
- LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
-
XM_047438934.1 → XP_047294890.1 urokinase plasminogen activator surface receptor isoform X11
-
XM_047438935.1 → XP_047294891.1 urokinase plasminogen activator surface receptor isoform X12
- UniProtKB/TrEMBL
-
Q9UPI5
-
XM_047438926.1 → XP_047294882.1 urokinase plasminogen activator surface receptor isoform X3
-
XM_047438928.1 → XP_047294884.1 urokinase plasminogen activator surface receptor isoform X5
- UniProtKB/TrEMBL
-
M0R1I2
- Conserved Domains (2) summary
-
- smart00134
Location:115 → 202
- LU; Ly-6 antigen / uPA receptor -like domain
- pfam00021
Location:25 → 99
- UPAR_LY6; u-PAR/Ly-6 domain
-
XM_047438925.1 → XP_047294881.1 urokinase plasminogen activator surface receptor isoform X1
- UniProtKB/Swiss-Prot
- A8K409, Q03405, Q12876, Q15845, Q16887, Q6IB52, Q9BWT0, Q9NYC8, Q9UD69, Q9UEA6, Q9UM92, Q9UMV0
-
XM_047438929.1 → XP_047294885.1 urokinase plasminogen activator surface receptor isoform X6
-
XM_047438930.1 → XP_047294886.1 urokinase plasminogen activator surface receptor isoform X7
-
XM_047438931.1 → XP_047294887.1 urokinase plasminogen activator surface receptor isoform X8
- UniProtKB/TrEMBL
-
M0QYR6
-
XM_017026872.3 → XP_016882361.1 urokinase plasminogen activator surface receptor isoform X2
-
XM_047438932.1 → XP_047294888.1 urokinase plasminogen activator surface receptor isoform X9
- UniProtKB/TrEMBL
-
Q9UPI5
- Related
- ENSP00000470029.1, ENST00000599892.5
- Conserved Domains (2) summary
-
- smart00134
Location:115 → 203
- LU; Ly-6 antigen / uPA receptor -like domain
- pfam00021
Location:25 → 99
- UPAR_LY6; u-PAR/Ly-6 domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
46467757..46492325 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054321218.1 → XP_054177193.1 urokinase plasminogen activator surface receptor isoform X14
-
XM_054321214.1 → XP_054177189.1 urokinase plasminogen activator surface receptor isoform X10
-
XM_054321217.1 → XP_054177192.1 urokinase plasminogen activator surface receptor isoform X13
- UniProtKB/TrEMBL
-
Q9UPI5
-
XM_054321208.1 → XP_054177183.1 urokinase plasminogen activator surface receptor isoform X4
-
XM_054321215.1 → XP_054177190.1 urokinase plasminogen activator surface receptor isoform X11
-
XM_054321216.1 → XP_054177191.1 urokinase plasminogen activator surface receptor isoform X12
- UniProtKB/TrEMBL
-
Q9UPI5
-
XM_054321207.1 → XP_054177182.1 urokinase plasminogen activator surface receptor isoform X3
-
XM_054321209.1 → XP_054177184.1 urokinase plasminogen activator surface receptor isoform X5
- UniProtKB/TrEMBL
-
M0R1I2
-
XM_054321205.1 → XP_054177180.1 urokinase plasminogen activator surface receptor isoform X1
- UniProtKB/Swiss-Prot
- A8K409, Q03405, Q12876, Q15845, Q16887, Q6IB52, Q9BWT0, Q9NYC8, Q9UD69, Q9UEA6, Q9UM92, Q9UMV0
-
XM_054321206.1 → XP_054177181.1 urokinase plasminogen activator surface receptor isoform X2
-
XM_054321210.1 → XP_054177185.1 urokinase plasminogen activator surface receptor isoform X6
-
XM_054321211.1 → XP_054177186.1 urokinase plasminogen activator surface receptor isoform X7
-
XM_054321212.1 → XP_054177187.1 urokinase plasminogen activator surface receptor isoform X8
- UniProtKB/TrEMBL
-
M0QYR6
-
XM_054321213.1 → XP_054177188.1 urokinase plasminogen activator surface receptor isoform X9
- UniProtKB/TrEMBL
-
Q9UPI5