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    Arl14epl ADP-ribosylation factor-like 14 effector protein-like [ Mus musculus (house mouse) ]

    Gene ID: 381142, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Arl14eplprovided by MGI
    Official Full Name
    ADP-ribosylation factor-like 14 effector protein-likeprovided by MGI
    Primary source
    MGI:MGI:2685795
    See related
    Ensembl:ENSMUSG00000073568 AllianceGenome:MGI:2685795
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm949
    Summary
    Orthologous to human ARL14EPL (ADP ribosylation factor like GTPase 14 effector protein like). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 7.9) See more
    Orthologs
    human all
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    Genomic context

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    See Arl14epl in Genome Data Viewer
    Location:
    18 C; 18 24.88 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (47054879..47067289)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (46921812..46934222)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr18:46901062-46901363 Neighboring gene adaptor-related protein complex 3, sigma 1 subunit Neighboring gene STARR-seq mESC enhancer starr_44521 Neighboring gene laeverin Neighboring gene STARR-seq mESC enhancer starr_44523 Neighboring gene predicted gene, 23610 Neighboring gene STARR-seq mESC enhancer starr_44529 Neighboring gene predicted gene 3744 Neighboring gene predicted gene, 49974

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Rodent-Specific MicroRNA Cluster within the Sfmbt2 Gene Is Imprinted and Essential for Placental Development. Inoue K, et al. Cell Rep, 2017 May 2. PMID 28467908
    2. USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities. Liu C, et al. Sci Adv, 2023 May 19. PMID 37196079, Free PMC Article
    3. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
    4. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    5. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ARL14 effector protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033446.2 → NP_001028618.1  ARL14 effector protein-like

      See identical proteins and their annotated locations for NP_001028618.1

      Status: PROVISIONAL

      Source sequence(s)
      AC132100
      Consensus CDS
      CCDS29237.1
      UniProtKB/Swiss-Prot
      Q3UKZ7
      Related
      ENSMUSP00000157009.2, ENSMUST00000234910.2
      Conserved Domains (1) summary
      pfam14949
      Location:37 → 138
      ARF7EP_C; ARF7 effector protein C-terminus

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      47054879..47067289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006526066.2 → XP_006526129.1  ARL14 effector protein-like isoform X1

      See identical proteins and their annotated locations for XP_006526129.1

      UniProtKB/Swiss-Prot
      Q3UKZ7
      Conserved Domains (1) summary
      pfam14949
      Location:37 → 138
      ARF7EP_C; ARF7 effector protein C-terminus
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3UKZ7.1 GenPept UniProtKB/Swiss-Prot:Q3UKZ7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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