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    AY512915 cDNA sequence AY512915 [ Mus musculus (house mouse) ]

    Gene ID: 414067, updated on 17-Aug-2024

    Summary

    Official Symbol
    AY512915provided by MGI
    Official Full Name
    cDNA sequence AY512915provided by MGI
    Primary source
    MGI:MGI:3041245
    See related
    Ensembl:ENSMUSG00000068180 AllianceGenome:MGI:3041245
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See AY512915 in Genome Data Viewer
    Location:
    6 D2; 6 44.32 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (95267555..95310974, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (95290574..95333993, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16739 Neighboring gene STARR-seq mESC enhancer starr_16740 Neighboring gene STARR-seq mESC enhancer starr_16741 Neighboring gene suppressor of Ty 4 homolog 1 pseudogene Neighboring gene eukaryotic translation elongation factor 1 gamma pseudogene Neighboring gene STARR-seq mESC enhancer starr_16742 Neighboring gene STARR-seq mESC enhancer starr_16743 Neighboring gene STARR-seq mESC enhancer starr_16744 Neighboring gene predicted gene, 53325 Neighboring gene STARR-seq mESC enhancer starr_16745 Neighboring gene STARR-seq mESC enhancer starr_16746 Neighboring gene STARR-seq mESC enhancer starr_16747 Neighboring gene succinate-Coenzyme A ligase, GDP-forming, beta subunit Neighboring gene STARR-positive B cell enhancer ABC_E10396 Neighboring gene STARR-seq mESC enhancer starr_16748 Neighboring gene STARR-seq mESC enhancer starr_16749 Neighboring gene STARR-positive B cell enhancer ABC_E4846 Neighboring gene STARR-positive B cell enhancer ABC_E11325 Neighboring gene STARR-positive B cell enhancer ABC_E4847

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033559.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK139655, AU045440, AY512915, BG084770
      Related
      ENSMUST00000159937.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      95267555..95310974 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)