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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012653.2 RefSeqGene
- Range
-
129107..514425
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001098484.3 → NP_001091954.1 electrogenic sodium bicarbonate cotransporter 1 isoform 1
See identical proteins and their annotated locations for NP_001091954.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript.
- Source sequence(s)
-
AC019089, AC079230, AC096713, AC110783
- Consensus CDS
-
CCDS43236.1
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Related
- ENSP00000264485.5, ENST00000264485.11
- Conserved Domains (1) summary
-
- TIGR00834
Location:109 → 1003
- ae; anion exchange protein
-
NM_001134742.2 → NP_001128214.1 electrogenic sodium bicarbonate cotransporter 1 isoform 3
See identical proteins and their annotated locations for NP_001128214.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 3' coding region that results in a frameshift, compared to variant 1. It encodes isoform 3 which has a longer and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC019089, AC079230, AC096713, AC110783
- Consensus CDS
-
CCDS47071.1
- UniProtKB/TrEMBL
- A0A8V8TNB1, A5JJ20
- Related
- ENSP00000393557.1, ENST00000425175.5
- Conserved Domains (3) summary
-
- TIGR00834
Location:109 → 1003
- ae; anion exchange protein
- pfam00955
Location:436 → 955
- HCO3_cotransp; HCO3- transporter family
- pfam07565
Location:137 → 387
- Band_3_cyto; Band 3 cytoplasmic domain
-
NM_003759.4 → NP_003750.1 electrogenic sodium bicarbonate cotransporter 1 isoform 2
See identical proteins and their annotated locations for NP_003750.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding region, compared to variant 1. These differences cause translation initiation at a downstream AUG and an isoform (2) with a shorter and distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AC019089, AC079230, AC110783
- Consensus CDS
-
CCDS3549.1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Related
- ENSP00000344272.3, ENST00000340595.4
- Conserved Domains (1) summary
-
- TIGR00834
Location:65 → 959
- ae; anion exchange protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
71062660..71572083
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024454268.2 → XP_024310036.1 electrogenic sodium bicarbonate cotransporter 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Related
- ENSP00000513771.1, ENST00000698522.1
- Conserved Domains (1) summary
-
- TIGR00834
Location:114 → 1008
- ae; anion exchange protein
-
XM_024454269.2 → XP_024310037.1 electrogenic sodium bicarbonate cotransporter 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Conserved Domains (1) summary
-
- TIGR00834
Location:114 → 1008
- ae; anion exchange protein
-
XM_024454270.2 → XP_024310038.1 electrogenic sodium bicarbonate cotransporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Related
- ENSP00000497468.1, ENST00000649996.1
- Conserved Domains (1) summary
-
- TIGR00834
Location:109 → 1003
- ae; anion exchange protein
-
XM_024454272.2 → XP_024310040.1 electrogenic sodium bicarbonate cotransporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Conserved Domains (1) summary
-
- TIGR00834
Location:109 → 1003
- ae; anion exchange protein
-
XM_024454271.2 → XP_024310039.1 electrogenic sodium bicarbonate cotransporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Conserved Domains (1) summary
-
- TIGR00834
Location:109 → 1003
- ae; anion exchange protein
-
XM_024454267.2 → XP_024310035.1 electrogenic sodium bicarbonate cotransporter 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
- Conserved Domains (1) summary
-
- TIGR00834
Location:140 → 1034
- ae; anion exchange protein
-
XM_017008792.2 → XP_016864281.1 electrogenic sodium bicarbonate cotransporter 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_047416348.1 → XP_047272304.1 electrogenic sodium bicarbonate cotransporter 1 isoform X7
-
XM_017008793.2 → XP_016864282.1 electrogenic sodium bicarbonate cotransporter 1 isoform X5
-
XM_011532390.3 → XP_011530692.1 electrogenic sodium bicarbonate cotransporter 1 isoform X6
- Conserved Domains (2) summary
-
- pfam00955
Location:250 → 769
- HCO3_cotransp; HCO3- transporter family
- pfam07565
Location:59 → 201
- Band_3_cyto; Band 3 cytoplasmic domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
74404936..74914352
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054351152.1 → XP_054207127.1 electrogenic sodium bicarbonate cotransporter 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351153.1 → XP_054207128.1 electrogenic sodium bicarbonate cotransporter 1 isoform X2
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351155.1 → XP_054207130.1 electrogenic sodium bicarbonate cotransporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351154.1 → XP_054207129.1 electrogenic sodium bicarbonate cotransporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351156.1 → XP_054207131.1 electrogenic sodium bicarbonate cotransporter 1 isoform X3
- UniProtKB/Swiss-Prot
- C4B714, O15153, Q8NEJ2, Q9H262, Q9NRZ1, Q9UIC0, Q9UIC1, Q9UP50, Q9Y6R1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351151.1 → XP_054207126.1 electrogenic sodium bicarbonate cotransporter 1 isoform X1
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351157.1 → XP_054207132.1 electrogenic sodium bicarbonate cotransporter 1 isoform X4
- UniProtKB/TrEMBL
-
A0A8V8TNB1
-
XM_054351158.1 → XP_054207133.1 electrogenic sodium bicarbonate cotransporter 1 isoform X5
-
XM_054351159.1 → XP_054207134.1 electrogenic sodium bicarbonate cotransporter 1 isoform X6