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    Ostn osteocrin [ Mus musculus (house mouse) ]

    Gene ID: 239790, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ostnprovided by MGI
    Official Full Name
    osteocrinprovided by MGI
    Primary source
    MGI:MGI:2677164
    See related
    Ensembl:ENSMUSG00000052276 AllianceGenome:MGI:2677164
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ostc
    Summary
    Enables signaling receptor binding activity. Acts upstream of or within several processes, including endochondral bone growth; negative regulation of D-glucose import; and negative regulation of osteoblast differentiation. Located in extracellular space. Is expressed in genitourinary system; heart; musculature; and skeleton. Orthologous to human OSTN (osteocrin). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ostn in Genome Data Viewer
    Location:
    16 B2; 16 18.88 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (27125733..27169959)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (27307641..27351209)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor accessory protein Neighboring gene predicted gene, 20319 Neighboring gene STARR-seq mESC enhancer starr_40487 Neighboring gene STARR-seq mESC enhancer starr_40489 Neighboring gene STARR-seq mESC enhancer starr_40490 Neighboring gene geminin coiled-coil domain containing Neighboring gene STARR-seq mESC enhancer starr_40491 Neighboring gene STARR-seq mESC enhancer starr_40492 Neighboring gene STARR-seq mESC enhancer starr_40493 Neighboring gene STARR-seq mESC enhancer starr_40494 Neighboring gene STARR-positive B cell enhancer mm9_chr16:27349423-27349723 Neighboring gene predicted gene, 32312 Neighboring gene STARR-positive B cell enhancer mm9_chr16:27388391-27388692 Neighboring gene voltage-dependent anion channel 3 pseudogene Neighboring gene STARR-seq mESC enhancer starr_40496 Neighboring gene urotensin 2B Neighboring gene coiled-coil domain containing 50

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables signaling receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198112.2NP_932780.1  osteocrin precursor

      See identical proteins and their annotated locations for NP_932780.1

      Status: PROVISIONAL

      Source sequence(s)
      AC154512
      Consensus CDS
      CCDS28090.1
      UniProtKB/Swiss-Prot
      P61364, Q149W1
      Related
      ENSMUSP00000067539.9, ENSMUST00000066852.9
      Conserved Domains (1) summary
      pfam11037
      Location:2130
      Musclin; Insulin-resistance promoting peptide in skeletal muscle

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      27125733..27169959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036159921.1XP_036015814.1  osteocrin isoform X1

      UniProtKB/Swiss-Prot
      P61364, Q149W1
      Conserved Domains (1) summary
      pfam11037
      Location:2130
      Musclin; Insulin-resistance promoting peptide in skeletal muscle