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    Tex12 testis expressed 12 [ Mus musculus (house mouse) ]

    Gene ID: 66654, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tex12provided by MGI
    Official Full Name
    testis expressed 12provided by MGI
    Primary source
    MGI:MGI:1913904
    See related
    Ensembl:ENSMUSG00000032065 AllianceGenome:MGI:1913904
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    5730518K06Rik
    Summary
    Acts upstream of or within meiotic DNA repair synthesis and synaptonemal complex assembly. Located in central element. Is expressed in embryo; oocyte; and spermatocyte. Orthologous to human TEX12 (testis expressed 12). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 2.2), liver adult (RPKM 0.2) and 1 other tissue See more
    Orthologs
    NEW
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    Genomic context

    See Tex12 in Genome Data Viewer
    Location:
    9 A5.3; 9 27.75 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (50468448..50472568, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (50557148..50561268, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:50341457-50341566 Neighboring gene 6-pyruvoyl-tetrahydropterin synthase Neighboring gene beta-carotene oxygenase 2 Neighboring gene interleukin 18 Neighboring gene succinate dehydrogenase complex, subunit D, integral membrane protein Neighboring gene translocase of inner mitochondrial membrane 8B Neighboring gene NKAP domain containing 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in central element IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in central element IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    located_in synaptonemal complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in synaptonemal complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    testis-expressed protein 12
    Names
    testis expressed gene 12
    testis exprtessed gene 12
    testis-expressed sequence 12 protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025687.3NP_079963.1  testis-expressed protein 12

      See identical proteins and their annotated locations for NP_079963.1

      Status: PROVISIONAL

      Source sequence(s)
      BC048458
      Consensus CDS
      CCDS40621.1
      UniProtKB/Swiss-Prot
      Q9CR81
      Related
      ENSMUSP00000149921.2, ENSMUST00000217236.2
      Conserved Domains (1) summary
      pfam15219
      Location:28122
      TEX12; Testis-expressed 12

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      50468448..50472568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)