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    Rhoh ras homolog family member H [ Mus musculus (house mouse) ]

    Gene ID: 74734, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rhohprovided by MGI
    Official Full Name
    ras homolog family member Hprovided by MGI
    Primary source
    MGI:MGI:1921984
    See related
    Ensembl:ENSMUSG00000029204 AllianceGenome:MGI:1921984
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arhh; 5830400A04Rik
    Summary
    Predicted to enable several functions, including GTP binding activity; GTPase activity; and kinase inhibitor activity. Involved in T cell differentiation and mast cell activation. Located in cytoplasm and immunological synapse. Is expressed in cranial ganglion; dorsal root ganglion; and sensory organ. Human ortholog(s) of this gene implicated in epidermodysplasia verruciformis. Orthologous to human RHOH (ras homolog family member H). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in thymus adult (RPKM 18.6), spleen adult (RPKM 6.0) and 2 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Rhoh in Genome Data Viewer
    Location:
    5 C3.1; 5 33.8 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (66018092..66054043)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (65860742..65896700)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_13273 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:66156164-66156347 Neighboring gene NEDD4 binding protein 2 Neighboring gene predicted gene 5296 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:66186562-66186763 Neighboring gene predicted gene 3521 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:66242163-66242364 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:66249264-66249516 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:66254646-66254891 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:66301684-66301897 Neighboring gene STARR-seq mESC enhancer starr_13274 Neighboring gene predicted gene, 32474 Neighboring gene predicted gene, 32556

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (5)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables kinase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables kinase inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in immunological synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    rho-related GTP-binding protein RhoH
    Names
    ras homolog gene family, member H

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081105.2NP_001074574.1  rho-related GTP-binding protein RhoH

      See identical proteins and their annotated locations for NP_001074574.1

      Status: VALIDATED

      Source sequence(s)
      AC156029
      Consensus CDS
      CCDS39100.1
      UniProtKB/Swiss-Prot
      Q9D3G9
      UniProtKB/TrEMBL
      Q3TEI3, Q504M6
      Related
      ENSMUSP00000143810.2, ENSMUST00000201533.2
      Conserved Domains (1) summary
      cd00157
      Location:5169
      Rho; Ras homology family (Rho) of small guanosine triphosphatases (GTPases)
    2. NM_001363454.1NP_001350383.1  rho-related GTP-binding protein RhoH

      Status: VALIDATED

      Source sequence(s)
      AC156029, AI448508, AK137909, AK138090
      Consensus CDS
      CCDS39100.1
      UniProtKB/Swiss-Prot
      Q9D3G9
      UniProtKB/TrEMBL
      Q3TEI3, Q504M6
      Related
      ENSMUSP00000031106.5, ENSMUST00000031106.8
      Conserved Domains (1) summary
      cd00157
      Location:5169
      Rho; Ras homology family (Rho) of small guanosine triphosphatases (GTPases)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      66018092..66054043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030254861.2XP_030110721.1  rho-related GTP-binding protein RhoH isoform X1

      UniProtKB/Swiss-Prot
      Q9D3G9
      UniProtKB/TrEMBL
      Q3TEI3, Q504M6
      Conserved Domains (1) summary
      cd00157
      Location:5169
      Rho; Ras homology family (Rho) of small guanosine triphosphatases (GTPases)
    2. XM_011240779.4XP_011239081.1  rho-related GTP-binding protein RhoH isoform X1

      See identical proteins and their annotated locations for XP_011239081.1

      UniProtKB/Swiss-Prot
      Q9D3G9
      UniProtKB/TrEMBL
      Q3TEI3, Q504M6
      Conserved Domains (1) summary
      cd00157
      Location:5169
      Rho; Ras homology family (Rho) of small guanosine triphosphatases (GTPases)