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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001037099.3 → NP_001032176.1 voltage-dependent L-type calcium channel subunit beta-4 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest protein (isoform a).
- Source sequence(s)
-
AL845467, AL928960
- Consensus CDS
-
CCDS16034.1
- UniProtKB/Swiss-Prot
- Q3UHK2, Q8BRN6, Q8CAJ9, Q8R0S4
- UniProtKB/TrEMBL
- A2ATZ8, Q3TYI5
- Related
- ENSMUSP00000077438.7, ENSMUST00000078324.7
- Conserved Domains (3) summary
-
- cd12043
Location:90 → 157
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam12052
Location:49 → 90
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl27059
Location:217 → 397
- Guanylate_kin; Guanylate kinase
-
NM_001285426.2 → NP_001272355.1 voltage-dependent L-type calcium channel subunit beta-4 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and CDS, and uses a downstream start codon compared to variant 1. The resulting protein (isoform c) has a shorter N-terminus compared to isoform a.
- Source sequence(s)
-
AL845467, AL928960
- UniProtKB/TrEMBL
-
Q3TYI5
- Conserved Domains (3) summary
-
- cd12043
Location:73 → 140
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:200 → 380
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:32 → 73
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001285427.2 → NP_001272356.1 voltage-dependent L-type calcium channel subunit beta-4 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks a portion of the 5' coding region compared to variant 1. This results in the use of a downstream start codon. The resulting protein (isoform d) is shorter and has a distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AL845467, AL928960
- Consensus CDS
-
CCDS71052.1
- UniProtKB/TrEMBL
-
Q3TYI5
- Related
- ENSMUSP00000099822.3, ENSMUST00000102761.9
- Conserved Domains (3) summary
-
- cd12043
Location:44 → 111
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:171 → 351
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:3 → 44
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001285428.1 → NP_001272357.1 voltage-dependent L-type calcium channel subunit beta-4 isoform e
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region and uses a downstream start codon compared to variant 1. The resulting protein (isoform e) is shorter and has a distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AK158606, AL845467
- UniProtKB/TrEMBL
-
Q3TYI5
- Conserved Domains (2) summary
-
- pfam00625
Location:32 → 212
- Guanylate_kin; Guanylate kinase
- cl17190
Location:42 → 213
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
-
NM_001355059.2 → NP_001341988.1 voltage-dependent L-type calcium channel subunit beta-4 isoform f
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and lacks a portion of the 5' coding region compared to variant 1. This results in the use of a downstream start codon. The resulting protein (isoform f) is shorter and has a distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AL845467, AL928960
- Conserved Domains (1) summary
-
- pfam00625
Location:65 → 245
- Guanylate_kin; Guanylate kinase
-
NM_146123.4 → NP_666235.1 voltage-dependent L-type calcium channel subunit beta-4 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks a portion of the 5' coding region compared to variant 1. This results in the use of a downstream start codon. The resulting protein (isoform b) is shorter and has a distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AL845467, AL928960
- Consensus CDS
-
CCDS16035.1
- UniProtKB/TrEMBL
-
Q3TYI5
- Related
- ENSMUSP00000099821.4, ENSMUST00000102760.10
- Conserved Domains (3) summary
-
- cd12043
Location:57 → 124
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:184 → 364
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:16 → 57
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
52318332..52566816 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036157800.1 → XP_036013693.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X4
- Conserved Domains (1) summary
-
- pfam00625
Location:40 → 220
- Guanylate_kin; Guanylate kinase
-
XM_036157798.1 → XP_036013691.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X3
- Conserved Domains (1) summary
-
- pfam00625
Location:65 → 245
- Guanylate_kin; Guanylate kinase
-
XM_036157797.1 → XP_036013690.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X2
- UniProtKB/TrEMBL
-
Q3TYI5
- Conserved Domains (3) summary
-
- cd12043
Location:44 → 111
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:171 → 351
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:3 → 44
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
XM_036157799.1 → XP_036013692.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X4
- Conserved Domains (1) summary
-
- pfam00625
Location:40 → 220
- Guanylate_kin; Guanylate kinase
-
XM_006497641.5 → XP_006497704.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X2
- UniProtKB/TrEMBL
-
Q3TYI5
- Conserved Domains (3) summary
-
- cd12043
Location:44 → 111
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:171 → 351
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:3 → 44
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
XM_030247010.2 → XP_030102870.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X3
- Conserved Domains (1) summary
-
- pfam00625
Location:65 → 245
- Guanylate_kin; Guanylate kinase
-
XM_006497642.5 → XP_006497705.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X3
- Conserved Domains (1) summary
-
- pfam00625
Location:65 → 245
- Guanylate_kin; Guanylate kinase
-
XM_036157801.1 → XP_036013694.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X4
- Conserved Domains (1) summary
-
- pfam00625
Location:40 → 220
- Guanylate_kin; Guanylate kinase
-
XM_036157802.1 → XP_036013695.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X4
- Conserved Domains (1) summary
-
- pfam00625
Location:40 → 220
- Guanylate_kin; Guanylate kinase
-
XM_017315163.2 → XP_017170652.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X2
- UniProtKB/TrEMBL
-
Q3TYI5
- Conserved Domains (3) summary
-
- cd12043
Location:44 → 111
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:171 → 351
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:3 → 44
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
XM_036157796.1 → XP_036013689.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X1
- UniProtKB/TrEMBL
-
Q3TYI5
- Conserved Domains (3) summary
-
- cd12043
Location:56 → 123
- SH3_CACNB4; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta4
- pfam00625
Location:183 → 363
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:15 → 56
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
XM_036157807.1 → XP_036013700.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X6
- Conserved Domains (1) summary
-
- pfam00625
Location:3 → 147
- Guanylate_kin; Guanylate kinase
-
XM_036157805.1 → XP_036013698.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X5
- Conserved Domains (1) summary
-
- pfam00625
Location:1 → 180
- Guanylate_kin; Guanylate kinase
-
XM_036157808.1 → XP_036013701.1 voltage-dependent L-type calcium channel subunit beta-4 isoform X6
- Conserved Domains (1) summary
-
- pfam00625
Location:3 → 147
- Guanylate_kin; Guanylate kinase