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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001403066.1 → NP_001389995.1 paxillin isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC159539
- UniProtKB/TrEMBL
-
A0A1D5RMM8
- Related
- ENSMUSP00000148843.3, ENSMUST00000212819.3
-
NM_001403067.1 → NP_001389996.1 paxillin isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC159539
- UniProtKB/TrEMBL
-
Q99LE7
-
NM_001403068.1 → NP_001389997.1 paxillin isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC159539
- UniProtKB/TrEMBL
- A0A0J9YV30, Q99LE7
-
NM_001403069.1 → NP_001389998.1 paxillin isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC159539
- UniProtKB/TrEMBL
- A0A0J9YV30, Q99LE7
- Related
- ENSMUSP00000144459.2, ENSMUST00000202564.2
-
NM_001403070.1 → NP_001389999.1 paxillin isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC159539
- UniProtKB/TrEMBL
- A0A0J9YV30, Q99LE7
-
NM_011223.4 → NP_035353.1 paxillin isoform alpha
See identical proteins and their annotated locations for NP_035353.1
Status: VALIDATED
- Source sequence(s)
-
AC159539
- Consensus CDS
-
CCDS19593.1
- UniProtKB/TrEMBL
-
Q3UG90
- Related
- ENSMUSP00000069624.9, ENSMUST00000067268.15
- Conserved Domains (5) summary
-
- cd09407
Location:383 → 434
- LIM2_Paxillin; The second LIM domain of paxillin
- cd09409
Location:442 → 494
- LIM3_Paxillin; The third LIM domain of paxillin
- cd09411
Location:501 → 552
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:324 → 376
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- pfam03535
Location:54 → 253
- Paxillin; Paxillin family
-
NM_133915.4 → NP_598676.2 paxillin isoform beta
See identical proteins and their annotated locations for NP_598676.2
Status: VALIDATED
- Source sequence(s)
-
AC159539
- Consensus CDS
-
CCDS39229.1
- UniProtKB/Swiss-Prot
- Q3TB62, Q3TZQ6, Q8VI36, Q8VI37
- UniProtKB/TrEMBL
-
F8VQ28
- Related
- ENSMUSP00000083709.4, ENSMUST00000086523.7
- Conserved Domains (5) summary
-
- cd09338
Location:476 → 528
- LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
- cd09407
Location:417 → 468
- LIM2_Paxillin; The second LIM domain of paxillin
- cd09411
Location:535 → 586
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:358 → 410
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- pfam03535
Location:54 → 253
- Paxillin; Paxillin family
RNA
-
NR_175347.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC159539
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
115630035..115694046
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030254218.2 → XP_030110078.1 paxillin isoform X7
- UniProtKB/TrEMBL
-
Q99LE7
- Conserved Domains (5) summary
-
- cd09338
Location:343 → 395
- LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
- cd09411
Location:402 → 453
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:225 → 277
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- cl02475
Location:284 → 335
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
- pfam03535
Location:1 → 120
- Paxillin; Paxillin family
-
XM_036164917.1 → XP_036020810.1 paxillin isoform X2
- UniProtKB/TrEMBL
-
A0A1D5RMM8
- Conserved Domains (5) summary
-
- cd09338
Location:842 → 894
- LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
- cd09407
Location:783 → 834
- LIM2_Paxillin; The second LIM domain of paxillin
- cd09411
Location:901 → 952
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:724 → 776
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- pfam03535
Location:54 → 253
- Paxillin; Paxillin family
-
XM_036164918.1 → XP_036020811.1 paxillin isoform X4
- UniProtKB/TrEMBL
-
A0A1D5RMM8
- Conserved Domains (5) summary
-
- cd09338
Location:753 → 805
- LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
- cd09407
Location:694 → 745
- LIM2_Paxillin; The second LIM domain of paxillin
- cd09411
Location:812 → 863
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:635 → 687
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- pfam03535
Location:54 → 253
- Paxillin; Paxillin family
-
XM_006530207.5 → XP_006530270.1 paxillin isoform X5
- Conserved Domains (1) summary
-
- pfam03535
Location:54 → 253
- Paxillin; Paxillin family
-
XM_006530205.4 → XP_006530268.1 paxillin isoform X3
See identical proteins and their annotated locations for XP_006530268.1
- UniProtKB/TrEMBL
-
A0A1D5RMM8
- Conserved Domains (5) summary
-
- cd09338
Location:840 → 892
- LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
- cd09407
Location:781 → 832
- LIM2_Paxillin; The second LIM domain of paxillin
- cd09411
Location:899 → 950
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:722 → 774
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- pfam03535
Location:1 → 120
- Paxillin; Paxillin family
-
XM_006530204.4 → XP_006530267.1 paxillin isoform X3
See identical proteins and their annotated locations for XP_006530267.1
- UniProtKB/TrEMBL
-
A0A1D5RMM8
- Conserved Domains (5) summary
-
- cd09338
Location:840 → 892
- LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
- cd09407
Location:781 → 832
- LIM2_Paxillin; The second LIM domain of paxillin
- cd09411
Location:899 → 950
- LIM4_Paxillin; The fourth LIM domain of Paxillin
- cd09336
Location:722 → 774
- LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
- pfam03535
Location:1 → 120
- Paxillin; Paxillin family
RNA
-
XR_004942462.1 RNA Sequence