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    PF3D7_1037600 TFIIH basal transcription factor complex helicase XPB subunit, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810526, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1037600
    Gene description
    TFIIH basal transcription factor complex helicase XPB subunit, putative
    Locus tag
    PF3D7_1037600
    See related
    PlasmoDB:PF3D7_1037600; VEuPathDB:PF3D7_1037600
    Gene type
    protein coding
    RNA name
    TFIIH basal transcription factor complex helicase XPB subunit, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1037600 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Sequence:
    Chromosome: 10; NC_037281.1 (1491414..1494378)

    Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene dynamin-like protein Neighboring gene enhancer of rudimentary homolog, putative Neighboring gene dynein intermediate chain, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037281.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables ATP hydrolysis activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within nucleotide-excision repair, DNA duplex unwinding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    TFIIH basal transcription factor complex helicase XPB subunit, putative
    XP_001347653.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037281.1 Reference assembly

      Range
      1491414..1494378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347617.1 → XP_001347653.1  TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347653.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V5A1, A0A024W7J3, A0A024WP52, A0A024X7Y0, A0A0L1IFI6, A0A0L7KBW1, A0A0X8MP39, Q8IJ31, W4IHI4, W4J4G5, W7FHK7, W7FLM4, W7JSJ4, W7JXB0
      Conserved Domains (1) summary
      TIGR00603
      Location:95 → 880
      rad25; DNA repair helicase rad25
    Nucleotide Protein
    Heading Accession and Version

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