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    PF3D7_1209200 U6 snRNA-associated Sm-like protein LSm7, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811145, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1209200
    Gene description
    U6 snRNA-associated Sm-like protein LSm7, putative
    Locus tag
    PF3D7_1209200
    See related
    PlasmoDB:PF3D7_1209200; VEuPathDB:PF3D7_1209200
    Gene type
    protein coding
    RNA name
    U6 snRNA-associated Sm-like protein LSm7, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1209200 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Sequence:
    Chromosome: 12; NC_037284.1 (427272..427978)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene mago-binding protein, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene telomere repeat-binding zinc finger protein Neighboring gene cytosolic iron-sulfur protein assembly protein 1, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within mRNA splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    part_of sno(s)RNA-containing ribonucleoprotein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    U6 snRNA-associated Sm-like protein LSm7, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      427272..427978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350465.1 → XP_001350501.1  U6 snRNA-associated Sm-like protein LSm7, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350501.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024W4C2, A0A0L0CVJ9, A0A0L1I488, A0A0L7KCK6, A0A0L7LYR6, A0A2I0BY58, Q8I5V6, W4IF33, W7FMM8
      Conserved Domains (1) summary
      cd01729
      Location:15 → 103
      LSm7; Like-Sm protein 7
    Nucleotide Protein
    Heading Accession and Version

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