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    PF3D7_1211800 polyubiquitin [ Plasmodium falciparum 3D7 ]

    Gene ID: 811170, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1211800
    Gene description
    polyubiquitin
    Locus tag
    PF3D7_1211800
    See related
    PlasmoDB:PF3D7_1211800; VEuPathDB:PF3D7_1211800
    Gene type
    protein coding
    RNA name
    polyubiquitin
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1211800 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Sequence:
    Chromosome: 12; NC_037284.1 (526109..527780)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene lysine-specific histone demethylase 1, putative Neighboring gene DNA replication licensing factor MCM5, putative Neighboring gene non-SERCA-type Ca2+ -transporting P-ATPase Neighboring gene glutathione peroxidase-like thioredoxin peroxidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lys48 ubiquitination during the intraerythrocytic cycle of the rodent malaria parasite, Plasmodium chabaudi. González-López L, et al. PLoS One, 2017. PMID 28604779, Free PMC Article
    2. Proteogenomic analysis of the total and surface-exposed proteomes of Plasmodium vivax salivary gland sporozoites. Swearingen KE, et al. PLoS Negl Trop Dis, 2017 Jul. PMID 28759593, Free PMC Article
    3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by GeneDB

    Process Evidence Code Pubs
    acts_upstream_of_or_within protein polyubiquitination ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    acts_upstream_of_or_within protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyubiquitin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      526109..527780
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350490.1 → XP_001350526.1  polyubiquitin [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350526.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7KD89, A0A2I0BYE7, Q7KQK2, Q9U5M1
      Conserved Domains (1) summary
      cd01803
      Location:77 → 152
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    Nucleotide Protein
    Heading Accession and Version

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