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    PF3D7_1249600 leucine-rich repeat protein [ Plasmodium falciparum 3D7 ]

    Gene ID: 811528, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1249600
    Gene description
    leucine-rich repeat protein
    Locus tag
    PF3D7_1249600
    See related
    PlasmoDB:PF3D7_1249600; VEuPathDB:PF3D7_1249600
    Gene type
    protein coding
    RNA name
    leucine-rich repeat protein
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1249600 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Sequence:
    Chromosome: 12; NC_037284.1 (2018995..2022007, complement)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene protein CutA, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene THO complex subunit 2, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expansion of Lysine-rich Repeats in Plasmodium Proteins Generates Novel Localization Sequences That Target the Periphery of the Host Erythrocyte. Davies HM, et al. J Biol Chem, 2016 Dec 9. PMID 27777305, Free PMC Article
    2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in host cell periphery RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      2018995..2022007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024473415.1 → XP_024329179.1  leucine-rich repeat protein [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L1IF68, A0A144A0U1, A0A2I0BZA2
      Conserved Domains (4) summary
      sd00031
      Location:402 → 431
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:56 → 83
      LRR_RI; leucine-rich repeat [structural motif]
      cl22451
      Location:551 → 621
      ASF1_hist_chap; ASF1 like histone chaperone
      cl39015
      Location:402 → 538
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    Nucleotide Protein
    Heading Accession and Version

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