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    PF3D7_1316500 pre-mRNA-processing factor 40, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 814069, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1316500
    Gene description
    pre-mRNA-processing factor 40, putative
    Locus tag
    PF3D7_1316500
    See related
    PlasmoDB:PF3D7_1316500; VEuPathDB:PF3D7_1316500
    Gene type
    protein coding
    RNA name
    pre-mRNA-processing factor 40, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1316500 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Sequence:
    Chromosome: 13; NC_004331.3 (685951..688671)

    Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene SAS6-like protein, putative Neighboring gene choline-phosphate cytidylyltransferase Neighboring gene conserved protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004331.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    pre-mRNA-processing factor 40, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004331.3 Reference assembly

      Range
      685951..688671
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349865.1 → XP_001349901.1  pre-mRNA-processing factor 40, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349901.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5K1K8A8, W4ID26, W7FHQ2, W7JQS0
      Conserved Domains (2) summary
      COG5104
      Location:261 → 710
      PRP40; Splicing factor [RNA processing and modification]
      pfam06346
      Location:32 → 161
      Drf_FH1; Formin Homology Region 1
    Nucleotide Protein
    Heading Accession and Version

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