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    PF3D7_0406500 NYN domain-containing protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 812391, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0406500
    Gene description
    NYN domain-containing protein, putative
    Locus tag
    PF3D7_0406500
    See related
    PlasmoDB:PF3D7_0406500; VEuPathDB:PF3D7_0406500
    Gene type
    protein coding
    RNA name
    NYN domain-containing protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0406500 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_004318.2 (334282..344054, complement)

    Chromosome 4 - NC_004318.2Genomic Context describing neighboring genes Neighboring gene sexual stage-specific protein precursor Neighboring gene cytosolic glyoxalase II Neighboring gene conserved protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004318.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    2. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    NYN domain-containing protein, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004318.2 Reference assembly

      Range
      334282..344054 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002808596.2 → XP_002808642.2  NYN domain-containing protein, putative [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7LWC8, C0H491
      Conserved Domains (4) summary
      COG0419
      Location:973 → 1551
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      COG1196
      Location:959 → 1257
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam07888
      Location:1420 → 1689
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
      cl20439
      Location:3029 → 3205
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
    Nucleotide Protein
    Heading Accession and Version

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