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    PF3D7_0912500 SAP domain-containing protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 813402, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0912500
    Gene description
    SAP domain-containing protein, putative
    Locus tag
    PF3D7_0912500
    See related
    PlasmoDB:PF3D7_0912500; VEuPathDB:PF3D7_0912500
    Gene type
    protein coding
    RNA name
    SAP domain-containing protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0912500 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Sequence:
    Chromosome: 9; NC_004330.2 (556090..557958)

    Chromosome 9 - NC_004330.2Genomic Context describing neighboring genes Neighboring gene conserved protein, unknown function Neighboring gene alkaline phosphatase, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004330.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mRNA-bound proteome of the human malaria parasite Plasmodium falciparum. Bunnik EM, et al. Genome Biol, 2016 Jul 5. PMID 27381095, Free PMC Article
    2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables mRNA binding HDA PubMed 
    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SAP domain-containing protein, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004330.2 Reference assembly

      Range
      556090..557958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002808885.1 → XP_002808931.1  SAP domain-containing protein, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_002808931.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024WD46, A0A2I0BSG5, C0H535, W4II07
      Conserved Domains (2) summary
      smart00513
      Location:4 → 37
      SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
      pfam18592
      Location:259 → 285
      Tho1_MOS11_C; Tho1/MOS11 C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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