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    MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 51275, updated on 10-Dec-2024

    Summary

    Official Symbol
    MAPKAPK5-AS1provided by HGNC
    Official Full Name
    MAPKAPK5 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:24091
    See related
    Ensembl:ENSG00000234608 AllianceGenome:HGNC:24091
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MAAS; C12orf47
    Expression
    Ubiquitous expression in colon (RPKM 6.8), lymph node (RPKM 5.9) and 25 other tissues See more
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    Genomic context

    See MAPKAPK5-AS1 in Genome Data Viewer
    Location:
    12q24.12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (111839767..111843005, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (111816678..111819916, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (112277571..112280809, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:112123487-112124188 Neighboring gene acyl-CoA dehydrogenase family member 10 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:112194124-112194765 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:112195407-112196048 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:112196049-112196688 Neighboring gene NANOG hESC enhancer GRCh37_chr12:112199468-112200003 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:112204196-112204965 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:112210937-112211508 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7039 Neighboring gene aldehyde dehydrogenase 2 family member Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:112228790-112229715 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:112229716-112230640 Neighboring gene microRNA 6761 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:112272338-112273217 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7040 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4876 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4877 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7041 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:112282209-112282377 Neighboring gene MAPK activated protein kinase 5 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:112292092-112292249 Neighboring gene ribosomal protein S2 pseudogene 41 Neighboring gene ADAM metallopeptidase domain 1A (pseudogene)

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Other Names

    • MAPKAPK5 antisense RNA 1 (non-protein coding)
    • apoptosis-related protein PNAS-1
    • lncRNA-cCSC1

    Clone Names

    • FLJ39616, AC003029.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015404.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC003029, AK096935, BC071748, JQ794500
      Related
      ENST00000428207.5
    2. NR_152605.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC003029, BC107695
      Related
      ENST00000692189.3
    3. NR_152606.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC003029, BC032560, BC107695
      Related
      ENST00000738352.1
    4. NR_152607.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC003029, BC007973, BC107695
      Related
      ENST00000442119.8
    5. NR_152608.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC003029, BC071748, BC107695
      Related
      ENST00000443596.3

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      111839767..111843005 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      111816678..111819916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)