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    Gm5174 predicted gene 5174 [ Mus musculus (house mouse) ]

    Gene ID: 382395, updated on 27-Nov-2024

    Summary

    Official Symbol
    Gm5174provided by MGI
    Official Full Name
    predicted gene 5174provided by MGI
    Primary source
    MGI:MGI:3646116
    See related
    AllianceGenome:MGI:3646116
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG382395
    Expression
    Restricted expression toward testis adult (RPKM 10.1) See more
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    Genomic context

    See Gm5174 in Genome Data Viewer
    Location:
    10 C1; 10 43.01 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (86491300..86506880)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (86655440..86671016)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 2B pseudogene Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 pseudogene Neighboring gene STARR-seq mESC enhancer starr_27466 Neighboring gene STARR-seq mESC enhancer starr_27467 Neighboring gene RIKEN cDNA 1810014B01 gene Neighboring gene heat shock protein 90, beta (Grp94), member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    uncharacterized protein LOC382395

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001384216.1NP_001371145.1  uncharacterized protein LOC382395

      Status: VALIDATED

      Source sequence(s)
      AC132384
      Conserved Domains (2) summary
      cd14337
      Location:275314
      UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
      cd14003
      Location:13261
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases

    RNA

    1. NR_169112.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC132384

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      86491300..86506880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036155880.1XP_036011773.1  uncharacterized protein LOC382395 isoform X2

      Conserved Domains (2) summary
      cd14337
      Location:275314
      UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
      cd14003
      Location:13261
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases
    2. XM_036155878.1XP_036011771.1  uncharacterized protein LOC382395 isoform X1

      Conserved Domains (2) summary
      cd14337
      Location:275314
      UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
      cd14003
      Location:13261
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases
    3. XM_487135.7XP_487135.3  uncharacterized protein LOC382395 isoform X1

      See identical proteins and their annotated locations for XP_487135.3

      Conserved Domains (2) summary
      cd14337
      Location:275314
      UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
      cd14003
      Location:13261
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases
    4. XM_036155879.1XP_036011772.1  uncharacterized protein LOC382395 isoform X1

      Conserved Domains (2) summary
      cd14337
      Location:275314
      UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
      cd14003
      Location:13261
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases
    5. XM_036155877.1XP_036011770.1  uncharacterized protein LOC382395 isoform X1

      Conserved Domains (2) summary
      cd14337
      Location:275314
      UBA_MARK_Par1; UBA domain found in microtubule-associated protein (MAP)/microtubule affinity-regulating kinase (MARK)/ partitioning-defective 1 (Par-1) and similar proteins
      cd14003
      Location:13261
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases