U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Klk4 kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) [ Mus musculus (house mouse) ]

    Gene ID: 56640, updated on 9-Dec-2024

    Summary

    Official Symbol
    Klk4provided by MGI
    Official Full Name
    kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)provided by MGI
    Primary source
    MGI:MGI:1861379
    See related
    Ensembl:ENSMUSG00000006948 AllianceGenome:MGI:1861379
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PSTS; ESMP1; KLK-L1; Prss17
    Summary
    Predicted to enable serine-type endopeptidase activity. Acts upstream of or within amelogenesis; extracellular matrix disassembly; and protein catabolic process. Predicted to be located in extracellular region. Predicted to be active in extracellular space and secretory granule. Is expressed in alimentary system; male reproductive gland or organ; and skin. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 2A1 and prostate cancer. Orthologous to human KLK4 (kallikrein related peptidase 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Klk4 in Genome Data Viewer
    Location:
    7 B3; 7 28.35 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (43530584..43535228)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (43881160..43885804)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene kallikrein related-peptidase 5 Neighboring gene predicted gene 45173 Neighboring gene kallikrein-related peptidase 2, pseudogene Neighboring gene kallikrein related-peptidase 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables serine-type endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in amelogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within amelogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in amelogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in biomineral tissue development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in extracellular matrix disassembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within extracellular matrix disassembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within protein catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein maturation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in secretory granule IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    kallikrein-4
    Names
    enamel matrix serine proteinase 1
    kallikrein-like protein 1
    protease, serine 17 (enamel matrix, prostate)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019928.2NP_064312.1  kallikrein-4 precursor

      See identical proteins and their annotated locations for NP_064312.1

      Status: VALIDATED

      Source sequence(s)
      AK087426, BC100717
      Consensus CDS
      CCDS21186.1
      UniProtKB/Swiss-Prot
      Q9JIS2, Q9Z0M1
      UniProtKB/TrEMBL
      A0A1R3UDT0
      Related
      ENSMUSP00000007161.6, ENSMUST00000007161.8
      Conserved Domains (1) summary
      cd00190
      Location:32251
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      43530584..43535228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)