U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cyp2a22 cytochrome P450, family 2, subfamily a, polypeptide 22 [ Mus musculus (house mouse) ]

    Gene ID: 233005, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Cyp2a22provided by MGI
    Official Full Name
    cytochrome P450, family 2, subfamily a, polypeptide 22provided by MGI
    Primary source
    MGI:MGI:3648316
    See related
    Ensembl:ENSMUSG00000091867 AllianceGenome:MGI:3648316
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG233005
    Summary
    Predicted to enable heme binding activity and monooxygenase activity. Predicted to be involved in coumarin metabolic process; epoxygenase P450 pathway; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward liver adult (RPKM 52.9) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Cyp2a22 in Genome Data Viewer
    Location:
    7 A3; 7 15.65 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (26631564..26638838, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (26931631..26939413, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Cyp2a5 5' regulatory region Neighboring gene cytochrome P450, family 2, subfamily a, polypeptide 5 Neighboring gene predicted gene, 57503 Neighboring gene apoptosis inhibitor 5, pseudogene Neighboring gene cytochrome P450, family 2, subfamily a, polypeptide 21, pseudogene Neighboring gene STARR-seq mESC enhancer starr_18341 Neighboring gene STARR-seq mESC enhancer starr_18342 Neighboring gene cytochrome P450, family 2, subfamily a, polypeptide 12 Neighboring gene predicted gene, 51444

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables arachidonate epoxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables heme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables oxidoreductase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables steroid hydroxylase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in coumarin metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in epoxygenase P450 pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in xenobiotic metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytochrome P450, family 2, subfamily a, polypeptide 22

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101467.2 → NP_001094937.1  cytochrome P450, family 2, subfamily a, polypeptide 22 isoform 1 precursor

      See identical proteins and their annotated locations for NP_001094937.1

      Status: VALIDATED

      Source sequence(s)
      AC167659
      Consensus CDS
      CCDS52156.1
      UniProtKB/TrEMBL
      B2RXZ2
      Related
      ENSMUSP00000128030.2, ENSMUST00000170227.3
      Conserved Domains (1) summary
      pfam00067
      Location:33 → 489
      p450; Cytochrome P450

    2. NM_001421745.1 → NP_001408674.1  cytochrome P450, family 2, subfamily a, polypeptide 22 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC167659

    3. NM_001421746.1 → NP_001408675.1  cytochrome P450, family 2, subfamily a, polypeptide 22 isoform 3 precursor

      Status: VALIDATED

      Source sequence(s)
      AC167659

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      26631564..26638838 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006539859.3 → XP_006539922.1  cytochrome P450, family 2, subfamily a, polypeptide 22 isoform X1

      Conserved Domains (1) summary
      pfam00067
      Location:33 → 431
      p450; Cytochrome P450
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous