U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yhfX putative PLP-binding protein YhfX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947889, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yhfX
    Official Full Name
    putative PLP-binding protein YhfX
    Primary source
    ECOCYC:G7733
    Locus tag
    b3381
    See related
    ASAP:ABE-0011048
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3368
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3509813..3510976, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2620 domain-containing protein YhfU Neighboring gene putative hydrolase Neighboring gene putative mutase YhfW Neighboring gene PRD domain-containing protein YhfY Neighboring gene putative DNA-binding transcriptional regulator YhfZ

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative PLP-binding protein YhfX

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3509813..3510976 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417840.1 putative PLP-binding protein YhfX [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417840.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5C9ACA5
      Conserved Domains (1) summary
      cd06811
      Location:1 → 382
      PLPDE_III_yhfX_like; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme yhfX
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.