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    ybdZ enterobactin biosynthesis protein YbdZ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 1450243, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybdZ
    Official Full Name
    enterobactin biosynthesis protein YbdZ
    Primary source
    ECOCYC:G0-10437
    Locus tag
    b4511
    See related
    ASAP:ABE-0285032
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0578
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    Genomic context

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    Sequence:
    NC_000913.3 (613942..614160)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ferric enterobactin outer membrane transporter Neighboring gene ferric enterobactin esterase Neighboring gene apo-serine activating enzyme Neighboring gene polysaccharide co-polymerase family protein FepE Neighboring gene ferric enterobactin ABC transporter ATP binding subunit Neighboring gene ferric enterobactin ABC transporter membrane subunit FepG Neighboring gene ferric enterobactin ABC transporter membrane subunit FebD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structures of a Nonribosomal Peptide Synthetase Module Bound to MbtH-like Proteins Support a Highly Dynamic Domain Architecture. Miller BR, et al. J Biol Chem, 2016 Oct 21. PMID 27597544, Free PMC Article
    2. Molecular characterization of the Escherichia coli enterobactin cistron entF and coupled expression of entF and the fes gene. Pettis GS, et al. J Bacteriol, 1987 Sep. PMID 3040679, Free PMC Article
    3. Characterization of the Functional Variance in MbtH-like Protein Interactions with a Nonribosomal Peptide Synthetase. Schomer RA, et al. Biochemistry, 2017 Oct 10. PMID 28880538, Free PMC Article
    4. MbtH-like proteins as integral components of bacterial nonribosomal peptide synthetases. Felnagle EA, et al. Biochemistry, 2010 Oct 19. PMID 20845982, Free PMC Article
    5. Reconstitution and characterization of the Escherichia coli enterobactin synthetase from EntB, EntE, and EntF. Gehring AM, et al. Biochemistry, 1998 Feb 24. PMID 9485415

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within enterobactin biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in enterobactin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within enterobactin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in siderophore biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    enterobactin biosynthesis protein YbdZ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      613942..614160
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_588441.1 enterobactin biosynthesis protein YbdZ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_588441.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H2V528, A0A192CID1, A0AA36KV75, Q1REX7
      Conserved Domains (1) summary
      COG3251
      Location:2 → 72
      MbtH; Uncharacterized conserved protein YbdZ, MbtH family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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