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    ZNF131 zinc finger protein 131 [ Homo sapiens (human) ]

    Gene ID: 7690, updated on 27-Nov-2024

    Summary

    Official Symbol
    ZNF131provided by HGNC
    Official Full Name
    zinc finger protein 131provided by HGNC
    Primary source
    HGNC:HGNC:12915
    See related
    Ensembl:ENSG00000172262 MIM:604073; AllianceGenome:HGNC:12915
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ZBTB35; pHZ-10
    Summary
    Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; regulation of cytokine production; and regulation of immune system process. Located in intermediate filament cytoskeleton and nucleoplasm. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in testis (RPKM 10.2), bone marrow (RPKM 5.2) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ZNF131 in Genome Data Viewer
    Location:
    5p12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (43120914..43176324)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (43373818..43429219)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (43121016..43176426)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ANXA2R overlapping transcript 1 Neighboring gene uncharacterized LOC100132356 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22532 Neighboring gene uncharacterized LOC100506639 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43073915-43074416 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43074417-43074916 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:43078210-43078763 Neighboring gene uncharacterized LOC124900972 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22533 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22534 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15990 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43121535-43122103 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:43122104-43122671 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15992 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:43192643-43193352 Neighboring gene spermine synthase pseudogene Neighboring gene NIM1 serine/threonine protein kinase Neighboring gene tubulin alpha pseudogene 14

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
    EBI GWAS Catalog

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of cytokine production IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of immune system process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in intermediate filament cytoskeleton IDA
    Inferred from Direct Assay
    more info
     
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    zinc finger protein 131
    Names
    zinc finger and BTB domain containing 35
    zinc finger protein 131 (clone pHZ-10)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001297548.3NP_001284477.1  zinc finger protein 131 isoform 1

      See identical proteins and their annotated locations for NP_001284477.1

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS78005.1
      UniProtKB/Swiss-Prot
      B4DRL3, P52739, Q6PIF0
      UniProtKB/TrEMBL
      B3KQ42
      Related
      ENSP00000426504.1, ENST00000509156.5
      Conserved Domains (6) summary
      smart00225
      Location:35122
      BTB; Broad-Complex, Tramtrack and Bric a brac
      COG5048
      Location:262444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:290311
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:422439
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24122
      BTB; BTB/POZ domain
      pfam13465
      Location:342367
      zf-H2C2_2; Zinc-finger double domain
    2. NM_001330704.2NP_001317633.1  zinc finger protein 131 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC106800
    3. NM_001330705.1NP_001317634.1  zinc finger protein 131 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC106800
    4. NM_001330706.2NP_001317635.1  zinc finger protein 131 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS43313.1
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (4) summary
      sd00017
      Location:256277
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:388405
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18221
      Location:16128
      BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
      pfam13465
      Location:308333
      zf-H2C2_2; Zinc-finger double domain
    5. NM_001330707.2NP_001317636.1  zinc finger protein 131 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS78005.1
      UniProtKB/Swiss-Prot
      B4DRL3, P52739, Q6PIF0
      UniProtKB/TrEMBL
      B3KQ42
      Related
      ENSP00000507111.1, ENST00000682664.1
      Conserved Domains (6) summary
      smart00225
      Location:35122
      BTB; Broad-Complex, Tramtrack and Bric a brac
      COG5048
      Location:262444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:290311
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:422439
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24122
      BTB; BTB/POZ domain
      pfam13465
      Location:342367
      zf-H2C2_2; Zinc-finger double domain
    6. NM_001330708.2NP_001317637.1  zinc finger protein 131 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS78005.1
      UniProtKB/Swiss-Prot
      B4DRL3, P52739, Q6PIF0
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (6) summary
      smart00225
      Location:35122
      BTB; Broad-Complex, Tramtrack and Bric a brac
      COG5048
      Location:262444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:290311
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:422439
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24122
      BTB; BTB/POZ domain
      pfam13465
      Location:342367
      zf-H2C2_2; Zinc-finger double domain
    7. NM_001330709.2NP_001317638.1  zinc finger protein 131 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC106800
    8. NM_001330710.2NP_001317639.1  zinc finger protein 131 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC106800
    9. NM_001330711.2NP_001317640.1  zinc finger protein 131 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS43313.1
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (4) summary
      sd00017
      Location:256277
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:388405
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18221
      Location:16128
      BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
      pfam13465
      Location:308333
      zf-H2C2_2; Zinc-finger double domain
    10. NM_001330712.2NP_001317641.1  zinc finger protein 131 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS78005.1
      UniProtKB/Swiss-Prot
      B4DRL3, P52739, Q6PIF0
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (6) summary
      smart00225
      Location:35122
      BTB; Broad-Complex, Tramtrack and Bric a brac
      COG5048
      Location:262444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:290311
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:422439
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24122
      BTB; BTB/POZ domain
      pfam13465
      Location:342367
      zf-H2C2_2; Zinc-finger double domain
    11. NM_001330713.2NP_001317642.1  zinc finger protein 131 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS43313.1
      UniProtKB/TrEMBL
      B3KQ42
      Related
      ENSP00000423945.1, ENST00000505606.6
      Conserved Domains (4) summary
      sd00017
      Location:256277
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:388405
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18221
      Location:16128
      BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
      pfam13465
      Location:308333
      zf-H2C2_2; Zinc-finger double domain
    12. NM_001330714.2NP_001317643.1  zinc finger protein 131 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS78005.1
      UniProtKB/Swiss-Prot
      B4DRL3, P52739, Q6PIF0
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (6) summary
      smart00225
      Location:35122
      BTB; Broad-Complex, Tramtrack and Bric a brac
      COG5048
      Location:262444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:290311
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:422439
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:24122
      BTB; BTB/POZ domain
      pfam13465
      Location:342367
      zf-H2C2_2; Zinc-finger double domain
    13. NM_001330715.2NP_001317644.1  zinc finger protein 131 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS43313.1
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (4) summary
      sd00017
      Location:256277
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:388405
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18221
      Location:16128
      BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
      pfam13465
      Location:308333
      zf-H2C2_2; Zinc-finger double domain
    14. NM_001330716.2NP_001317645.1  zinc finger protein 131 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC106800
      UniProtKB/TrEMBL
      B3KQ42
    15. NM_001330717.2NP_001317646.1  zinc finger protein 131 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC106800
      UniProtKB/TrEMBL
      B3KQ42
      Conserved Domains (4) summary
      COG5048
      Location:167331
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:177198
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:309326
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:229254
      zf-H2C2_2; Zinc-finger double domain
    16. NM_001388319.1NP_001375248.1  zinc finger protein 131 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS43313.1
      UniProtKB/TrEMBL
      B3KQ42
      Related
      ENSP00000421246.1, ENST00000509634.5
      Conserved Domains (4) summary
      sd00017
      Location:256277
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:388405
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18221
      Location:16128
      BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
      pfam13465
      Location:308333
      zf-H2C2_2; Zinc-finger double domain
    17. NM_003432.4NP_003423.1  zinc finger protein 131 isoform 2

      See identical proteins and their annotated locations for NP_003423.1

      Status: VALIDATED

      Source sequence(s)
      AC106800
      Consensus CDS
      CCDS43313.1
      UniProtKB/TrEMBL
      B3KQ42
      Related
      ENSP00000305804.4, ENST00000306938.8
      Conserved Domains (4) summary
      sd00017
      Location:256277
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:388405
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18221
      Location:16128
      BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
      pfam13465
      Location:308333
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      43120914..43176324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      43373818..43429219
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)