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    4930592C13Rik RIKEN cDNA 4930592C13 gene [ Mus musculus (house mouse) ]

    Gene ID: 381498, updated on 26-Oct-2024

    Summary

    Official Symbol
    4930592C13Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930592C13 geneprovided by MGI
    Primary source
    MGI:MGI:2686503
    See related
    AllianceGenome:MGI:2686503
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1657; Gm43159
    Expression
    Biased expression in testis adult (RPKM 8.4) and subcutaneous fat pad adult (RPKM 0.2) See more
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    Genomic context

    See 4930592C13Rik in Genome Data Viewer
    Location:
    3; 3 H4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (157233152..157239727, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (157527515..157534090, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23379 Neighboring gene STARR-seq mESC enhancer starr_09370 Neighboring gene predicted gene 5983 Neighboring gene STARR-seq mESC enhancer starr_09371 Neighboring gene zinc finger, RAN-binding domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_09372 Neighboring gene microRNA 186 Neighboring gene STARR-positive B cell enhancer mm9_chr3:157228208-157228509 Neighboring gene prostaglandin E receptor 3 (subtype EP3) Neighboring gene STARR-seq mESC enhancer starr_09373 Neighboring gene STARR-seq mESC enhancer starr_09375 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:157279973-157280264

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_152231.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK076987

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      157233152..157239727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)