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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_021681.3 → NP_067713.2 band 4.1-like protein 1 isoform L
See identical proteins and their annotated locations for NP_067713.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (L).
- Source sequence(s)
-
JAXUCZ010000003
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
- Related
- ENSRNOP00000071420.1, ENSRNOT00000089719.3
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1412 → 1537
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
NM_172090.4 → NP_742087.1 band 4.1-like protein 1 isoform S
See identical proteins and their annotated locations for NP_742087.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform S, which is shorter than isoform L.
- Source sequence(s)
-
JAXUCZ010000003
- UniProtKB/Swiss-Prot
- Q9WTP0, Q9WTP1
- UniProtKB/TrEMBL
- A6KIB0, D4A9L5
- Related
- ENSRNOP00000071845.4, ENSRNOT00000080543.4
- Conserved Domains (7) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam00373
Location:183 → 288
- FERM_M; FERM central domain
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:741 → 866
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 425
- FA; FERM adjacent (FA)
- pfam09379
Location:101 → 164
- FERM_N; FERM N-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086021.1 Reference GRCr8
- Range
-
165389295..165512821
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_063284435.1 → XP_063140505.1 band 4.1-like protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
-
XM_017592007.3 → XP_017447496.1 band 4.1-like protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1412 → 1537
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_017592006.3 → XP_017447495.1 band 4.1-like protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1412 → 1537
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_017592010.3 → XP_017447499.1 band 4.1-like protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1412 → 1537
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_063284445.1 → XP_063140515.1 band 4.1-like protein 1 isoform X14
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_017592005.3 → XP_017447494.1 band 4.1-like protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1412 → 1537
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_063284436.1 → XP_063140506.1 band 4.1-like protein 1 isoform X8
- UniProtKB/Swiss-Prot
- Q9WTP0, Q9WTP1
- UniProtKB/TrEMBL
- A6KIB0, D4A9L5
- Related
- ENSRNOP00000072128.4, ENSRNOT00000087289.4
-
XM_063284442.1 → XP_063140512.1 band 4.1-like protein 1 isoform X12
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_063284440.1 → XP_063140510.1 band 4.1-like protein 1 isoform X10
- UniProtKB/TrEMBL
- A0A0G2K0B2, A6KIB1, D4A9L5
- Related
- ENSRNOP00000071375.2, ENSRNOT00000085938.4
-
XM_063284444.1 → XP_063140514.1 band 4.1-like protein 1 isoform X14
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_063284446.1 → XP_063140516.1 band 4.1-like protein 1 isoform X15
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_008762381.4 → XP_008760603.1 band 4.1-like protein 1 isoform X3
See identical proteins and their annotated locations for XP_008760603.1
- UniProtKB/TrEMBL
- A0A0G2K0F3, D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1412 → 1537
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_063284438.1 → XP_063140508.1 band 4.1-like protein 1 isoform X10
- UniProtKB/TrEMBL
- A0A0G2K0B2, A6KIB1, D4A9L5
-
XM_063284443.1 → XP_063140513.1 band 4.1-like protein 1 isoform X14
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_063284437.1 → XP_063140507.1 band 4.1-like protein 1 isoform X9
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_063284441.1 → XP_063140511.1 band 4.1-like protein 1 isoform X11
- UniProtKB/TrEMBL
-
D4A9L5
- Related
- ENSRNOP00000074285.4, ENSRNOT00000087907.4
-
XM_063284447.1 → XP_063140517.1 band 4.1-like protein 1 isoform X15
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_039105759.1 → XP_038961687.1 band 4.1-like protein 1 isoform X6
- UniProtKB/TrEMBL
-
D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:1428 → 1481
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_017592011.1 → XP_017447500.1 band 4.1-like protein 1 isoform X5
- UniProtKB/TrEMBL
-
D3ZMI4
-
XM_017592012.1 → XP_017447501.1 band 4.1-like protein 1 isoform X7
- UniProtKB/TrEMBL
-
D4A9L5
-
XM_039105762.1 → XP_038961690.1 band 4.1-like protein 1 isoform X13
- UniProtKB/TrEMBL
- D4A9L5, D4ACZ4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:493 → 524
- SAB; SAB domain
- pfam05902
Location:606 → 730
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)
-
XM_017592004.1 → XP_017447493.1 band 4.1-like protein 1 isoform X2
- UniProtKB/TrEMBL
-
D3ZMI4
-
XM_063284448.1 → XP_063140518.1 band 4.1-like protein 1 isoform X16
-
XM_017592003.1 → XP_017447492.1 band 4.1-like protein 1 isoform X1
- UniProtKB/TrEMBL
-
D3ZMI4
-
XM_039105757.1 → XP_038961685.1 band 4.1-like protein 1 isoform X4
- UniProtKB/TrEMBL
-
D3ZMI4
- Conserved Domains (5) summary
-
- smart00295
Location:98 → 288
- B41; Band 4.1 homologues
- cd13184
Location:283 → 376
- FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
- pfam04382
Location:474 → 504
- SAB; SAB domain
- pfam05902
Location:1394 → 1518
- 4_1_CTD; 4.1 protein C-terminal domain (CTD)
- pfam08736
Location:385 → 428
- FA; FERM adjacent (FA)