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    Stt3a STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) [ Mus musculus (house mouse) ]

    Gene ID: 16430, updated on 9-Dec-2024

    Summary

    Official Symbol
    Stt3aprovided by MGI
    Official Full Name
    STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)provided by MGI
    Primary source
    MGI:MGI:105124
    See related
    Ensembl:ENSMUSG00000032116 AllianceGenome:MGI:105124
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    B5; Itm1
    Summary
    Predicted to enable dolichyl-diphosphooligosaccharide-protein glycotransferase activity. Predicted to be involved in co-translational protein modification; post-translational protein modification; and protein N-linked glycosylation via asparagine. Located in membrane. Is expressed in several structures, including craniocervical region bone and thoracic segment skeleton. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Iw. Orthologous to human STT3A (STT3 oligosaccharyltransferase complex catalytic subunit A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 52.7), genital fat pad adult (RPKM 23.1) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Stt3a in Genome Data Viewer
    Location:
    9 A4; 9 20.67 cM
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (36640640..36678918, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (36729344..36767622, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene acrosomal vesicle protein 1 Neighboring gene checkpoint kinase 1 Neighboring gene STARR-positive B cell enhancer ABC_E709 Neighboring gene predicted gene, 26787 Neighboring gene etoposide induced 2.4 mRNA Neighboring gene predicted gene 27219 Neighboring gene fasciculation and elongation protein zeta 1

    Genomic regions, transcripts, and products

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in co-translational protein modification ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in co-translational protein modification ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in post-translational protein modification IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein N-linked glycosylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein N-linked glycosylation via asparagine IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein N-linked glycosylation via asparagine ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein N-linked glycosylation via asparagine ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of oligosaccharyltransferase complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of oligosaccharyltransferase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of oligosaccharyltransferase complex NAS
    Non-traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
    Names
    integral membrane protein 1
    oligosaccharyl transferase subunit STT3A
    NP_032434.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008408.5NP_032434.3  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

      See identical proteins and their annotated locations for NP_032434.3

      Status: VALIDATED

      Source sequence(s)
      AC155921, AK050050, AK150640, AK153840
      Consensus CDS
      CCDS52768.1
      UniProtKB/Swiss-Prot
      P46978
      UniProtKB/TrEMBL
      Q3TG02, Q3TUR1, Q3TVN9, Q3U573, Q3U9H4, Q3UA28, Q5U412
      Related
      ENSMUSP00000113116.2, ENSMUST00000120381.9
      Conserved Domains (1) summary
      pfam02516
      Location:17484
      STT3; Oligosaccharyl transferase STT3 subunit

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      36640640..36678918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)