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    Actl11 actin-like 11 [ Mus musculus (house mouse) ]

    Gene ID: 67722, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Actl11provided by MGI
    Official Full Name
    actin-like 11provided by MGI
    Primary source
    MGI:MGI:1914972
    See related
    Ensembl:ENSMUSG00000066368 AllianceGenome:MGI:1914972
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4921517D21Rik
    Summary
    Predicted to be active in actin cytoskeleton. Orthologous to human ACTL11P (actin like 11, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Actl11 in Genome Data Viewer
    Location:
    9 F1; 9 59.07 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (107805668..107809660)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (107928469..107932461)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23856 Neighboring gene macrophage stimulating 1 receptor (c-met-related tyrosine kinase) Neighboring gene CaM kinase-like vesicle-associated Neighboring gene TRAF-interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic variation in Mon1a affects protein trafficking and modifies macrophage iron loading in mice. Wang F, et al. Nat Genet, 2007 Aug. PMID 17632513
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC141498

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC67722

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026338.3 → NP_080614.1  uncharacterized protein LOC67722

      See identical proteins and their annotated locations for NP_080614.1

      Status: VALIDATED

      Source sequence(s)
      AL731808
      Consensus CDS
      CCDS23510.1
      UniProtKB/TrEMBL
      Q14BL3, Q9D5V1
      Related
      ENSMUSP00000082150.2, ENSMUST00000085073.2
      Conserved Domains (2) summary
      pfam00022
      Location:860 → 1205
      Actin; Actin
      cl17037
      Location:860 → 1204
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      107805668..107809660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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