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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001145008.2 → NP_001138480.1 butyrophilin subfamily 3 member A1 isoform c precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site in the central coding region, compared to variant 1, resulting in an isoform (c) that is shorter than isoform a.
- Source sequence(s)
-
AA977088, AK299327, AL021917, BC118586, DC417480
- Consensus CDS
-
CCDS47388.1
- UniProtKB/TrEMBL
-
B4DQ62
- Related
- ENSP00000406667.2, ENST00000414912.2
- Conserved Domains (3) summary
-
- cd05713
Location:45 → 144
- Ig_MOG_like; Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)
- smart00410
Location:37 → 143
- IG_like; Immunoglobulin like
- cd15820
Location:285 → 460
- SPRY_PRY_BTN3; PRY/SPRY domain of butyrophilin 3 (BTN3), includes BTN3A1, BTN3A2, BTN3A3 as well as BTN-like 3 (BTNL3); BTN3A also known as CD277
-
NM_001145009.2 → NP_001138481.1 butyrophilin subfamily 3 member A1 isoform d precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site in the 3' coding region that results in a frameshift, compared to variant 1. The resulting isoform (d) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AA977088, AK291162, AK295720, AL021917, BC118586, BC121800, DA044176, DC417480
- Consensus CDS
-
CCDS47389.1
- UniProtKB/TrEMBL
-
A8K547
- Related
- ENSP00000396684.2, ENST00000425234.6
- Conserved Domains (3) summary
-
- cd05713
Location:45 → 144
- Ig_MOG_like; Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)
- smart00410
Location:37 → 143
- IG_like; Immunoglobulin like
- cl11960
Location:155 → 222
- Ig; Immunoglobulin domain
-
NM_007048.6 → NP_008979.3 butyrophilin subfamily 3 member A1 isoform a precursor
See identical proteins and their annotated locations for NP_008979.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AA977088, AL021917, BC118586, DC417480
- Consensus CDS
-
CCDS4608.1
- UniProtKB/Swiss-Prot
- A2A278, A8K2C8, B4DIQ1, B4DRM2, E9PGB4, E9PHG8, O00481, Q0P515, Q147X5, Q53F15, Q99420, Q9HCY1
- UniProtKB/TrEMBL
-
B4DQ62
- Related
- ENSP00000289361.6, ENST00000289361.11
- Conserved Domains (3) summary
-
- cd05713
Location:45 → 144
- Ig_MOG_like; Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)
- smart00410
Location:37 → 143
- IG_like; Immunoglobulin like
- cd15820
Location:337 → 512
- SPRY_PRY_BTN3; PRY/SPRY domain of butyrophilin 3 (BTN3), includes BTN3A1, BTN3A2, BTN3A3 as well as BTN-like 3 (BTNL3); BTN3A also known as CD277
-
NM_194441.3 → NP_919423.1 butyrophilin subfamily 3 member A1 isoform b precursor
See identical proteins and their annotated locations for NP_919423.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' and 3' UTRs, and uses an alternate splice site in the 3' coding region, compared to variant 1. The resulting isoform (b) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AA977088, AK291162, AL021917, BC118586, DA044176
- Consensus CDS
-
CCDS4609.1
- UniProtKB/TrEMBL
-
A8K547
- Related
- ENSP00000420010.2, ENST00000476549.6
- Conserved Domains (3) summary
-
- cd05713
Location:45 → 144
- Ig_MOG_like; Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)
- smart00410
Location:37 → 143
- IG_like; Immunoglobulin like
- cl11960
Location:155 → 222
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
26402275..26415208
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047418124.1 → XP_047274080.1 butyrophilin subfamily 3 member A1 isoform X4
- UniProtKB/TrEMBL
-
A8K547
-
XM_047418120.1 → XP_047274076.1 butyrophilin subfamily 3 member A1 isoform X1
- UniProtKB/Swiss-Prot
- A2A278, A8K2C8, B4DIQ1, B4DRM2, E9PGB4, E9PHG8, O00481, Q0P515, Q147X5, Q53F15, Q99420, Q9HCY1
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_047418122.1 → XP_047274078.1 butyrophilin subfamily 3 member A1 isoform X2
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_047418129.1 → XP_047274085.1 butyrophilin subfamily 3 member A1 isoform X8
- UniProtKB/TrEMBL
-
A8K547
-
XM_047418123.1 → XP_047274079.1 butyrophilin subfamily 3 member A1 isoform X3
- UniProtKB/TrEMBL
-
A8K547
-
XM_047418121.1 → XP_047274077.1 butyrophilin subfamily 3 member A1 isoform X1
- UniProtKB/Swiss-Prot
- A2A278, A8K2C8, B4DIQ1, B4DRM2, E9PGB4, E9PHG8, O00481, Q0P515, Q147X5, Q53F15, Q99420, Q9HCY1
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_005248834.5 → XP_005248891.1 butyrophilin subfamily 3 member A1 isoform X4
See identical proteins and their annotated locations for XP_005248891.1
- UniProtKB/TrEMBL
-
A8K547
- Conserved Domains (3) summary
-
- cd05713
Location:45 → 144
- Ig_MOG_like; Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)
- smart00410
Location:37 → 143
- IG_like; Immunoglobulin like
- cl11960
Location:155 → 222
- Ig; Immunoglobulin domain
-
XM_047418125.1 → XP_047274081.1 butyrophilin subfamily 3 member A1 isoform X5
- UniProtKB/TrEMBL
-
A8K547
-
XM_005248833.3 → XP_005248890.1 butyrophilin subfamily 3 member A1 isoform X2
- UniProtKB/TrEMBL
-
B4DQ62
- Related
-
ENST00000082468.11
- Conserved Domains (3) summary
-
- cd05713
Location:45 → 144
- Ig_MOG_like; Immunoglobulin (Ig)-like domain of myelin oligodendrocyte glycoprotein (MOG)
- smart00410
Location:37 → 143
- IG_like; Immunoglobulin like
- cd15820
Location:330 → 505
- SPRY_PRY_BTN3; PRY/SPRY domain of butyrophilin 3 (BTN3), includes BTN3A1, BTN3A2, BTN3A3 as well as BTN-like 3 (BTNL3); BTN3A also known as CD277
-
XM_047418126.1 → XP_047274082.1 butyrophilin subfamily 3 member A1 isoform X6
- UniProtKB/TrEMBL
-
A8K547
-
XM_047418128.1 → XP_047274084.1 butyrophilin subfamily 3 member A1 isoform X8
- UniProtKB/TrEMBL
-
A8K547
-
XM_047418127.1 → XP_047274083.1 butyrophilin subfamily 3 member A1 isoform X7
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
26270639..26289982
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054354120.1 → XP_054210095.1 butyrophilin subfamily 3 member A1 isoform X9
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354118.1 → XP_054210093.1 butyrophilin subfamily 3 member A1 isoform X4
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354112.1 → XP_054210087.1 butyrophilin subfamily 3 member A1 isoform X1
- UniProtKB/Swiss-Prot
- A2A278, A8K2C8, B4DIQ1, B4DRM2, E9PGB4, E9PHG8, O00481, Q0P515, Q147X5, Q53F15, Q99420, Q9HCY1
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_054354115.1 → XP_054210090.1 butyrophilin subfamily 3 member A1 isoform X2
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_054354124.1 → XP_054210099.1 butyrophilin subfamily 3 member A1 isoform X8
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354116.1 → XP_054210091.1 butyrophilin subfamily 3 member A1 isoform X3
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354113.1 → XP_054210088.1 butyrophilin subfamily 3 member A1 isoform X1
- UniProtKB/Swiss-Prot
- A2A278, A8K2C8, B4DIQ1, B4DRM2, E9PGB4, E9PHG8, O00481, Q0P515, Q147X5, Q53F15, Q99420, Q9HCY1
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_054354117.1 → XP_054210092.1 butyrophilin subfamily 3 member A1 isoform X4
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354119.1 → XP_054210094.1 butyrophilin subfamily 3 member A1 isoform X5
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354114.1 → XP_054210089.1 butyrophilin subfamily 3 member A1 isoform X2
- UniProtKB/TrEMBL
-
B4DQ62
-
XM_054354121.1 → XP_054210096.1 butyrophilin subfamily 3 member A1 isoform X6
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354123.1 → XP_054210098.1 butyrophilin subfamily 3 member A1 isoform X8
- UniProtKB/TrEMBL
-
A8K547
-
XM_054354122.1 → XP_054210097.1 butyrophilin subfamily 3 member A1 isoform X7