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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001199302.2 → NP_001186231.1 CCR4-NOT transcription complex subunit 2 isoform a
See identical proteins and their annotated locations for NP_001186231.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-3 and 5 all encode the same isoform (a).
- Source sequence(s)
-
AA234384, AC025569, AC092881, AK315715, BC002597
- Consensus CDS
-
CCDS31857.1
- UniProtKB/Swiss-Prot
- Q9H3E0, Q9NSX5, Q9NWR6, Q9NZN8, Q9P028
- UniProtKB/TrEMBL
-
B3KTL6
- Related
- ENSP00000412091.3, ENST00000418359.7
- Conserved Domains (1) summary
-
- pfam04153
Location:396 → 519
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001199303.2 → NP_001186232.1 CCR4-NOT transcription complex subunit 2 isoform a
See identical proteins and their annotated locations for NP_001186232.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a). Variants 1-3 and 5 all encode the same isoform (a).
- Source sequence(s)
-
AA234384, AC025569, AK095789, AK307479, BC002597
- Consensus CDS
-
CCDS31857.1
- UniProtKB/Swiss-Prot
- Q9H3E0, Q9NSX5, Q9NWR6, Q9NZN8, Q9P028
- UniProtKB/TrEMBL
-
B3KTL6
- Related
- ENSP00000449260.1, ENST00000551043.5
- Conserved Domains (1) summary
-
- pfam04153
Location:396 → 519
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
NM_001414651.1 → NP_001401580.1 CCR4-NOT transcription complex subunit 2 isoform a
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/Swiss-Prot
- Q9H3E0, Q9NSX5, Q9NWR6, Q9NZN8, Q9P028
- UniProtKB/TrEMBL
-
B3KTL6
-
NM_001414652.1 → NP_001401581.1 CCR4-NOT transcription complex subunit 2 isoform b
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
-
B3KTL6
-
NM_001414653.1 → NP_001401582.1 CCR4-NOT transcription complex subunit 2 isoform c
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VV52
- Related
- ENSP00000449659.1, ENST00000548159.5
-
NM_001414654.1 → NP_001401583.1 CCR4-NOT transcription complex subunit 2 isoform c
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VV52
-
NM_001414655.1 → NP_001401584.1 CCR4-NOT transcription complex subunit 2 isoform c
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VV52
-
NM_001414656.1 → NP_001401585.1 CCR4-NOT transcription complex subunit 2 isoform d
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
-
B3KTL6
-
NM_001414657.1 → NP_001401586.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
-
NM_001414658.1 → NP_001401587.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
-
NM_001414659.1 → NP_001401588.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
-
NM_001414660.1 → NP_001401589.1 CCR4-NOT transcription complex subunit 2 isoform e
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
- Related
- ENSP00000448024.2, ENST00000550641.6
-
NM_001414661.1 → NP_001401590.1 CCR4-NOT transcription complex subunit 2 isoform f
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
-
B3KTL6
-
NM_001414662.1 → NP_001401591.1 CCR4-NOT transcription complex subunit 2 isoform g
Status: REVIEWED
- Source sequence(s)
-
AC025569, AC092881
- UniProtKB/TrEMBL
- B2RDX7, B3KTL6
-
NM_014515.7 → NP_055330.1 CCR4-NOT transcription complex subunit 2 isoform a
See identical proteins and their annotated locations for NP_055330.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-3 and 5 all encode the same isoform (a).
- Source sequence(s)
-
AC025569, AC092881
- Consensus CDS
-
CCDS31857.1
- UniProtKB/Swiss-Prot
- Q9H3E0, Q9NSX5, Q9NWR6, Q9NZN8, Q9P028
- UniProtKB/TrEMBL
-
B3KTL6
- Related
- ENSP00000229195.3, ENST00000229195.8
- Conserved Domains (1) summary
-
- pfam04153
Location:396 → 519
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
RNA
-
NR_037615.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) includes an alternate internal exon compared to variant 1. This variant is represented as non-coding because use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA234384, AC025569, AK307479, BC002597
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
70243018..70354993
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047428882.1 → XP_047284838.1 CCR4-NOT transcription complex subunit 2 isoform X2
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
-
XM_017019348.2 → XP_016874837.1 CCR4-NOT transcription complex subunit 2 isoform X1
- UniProtKB/TrEMBL
- B3KTL6, F8VV52
- Conserved Domains (1) summary
-
- pfam04153
Location:387 → 510
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
XM_024448986.2 → XP_024304754.1 CCR4-NOT transcription complex subunit 2 isoform X5
- Conserved Domains (1) summary
-
- pfam04153
Location:250 → 373
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
XM_006719433.5 → XP_006719496.1 CCR4-NOT transcription complex subunit 2 isoform X4
See identical proteins and their annotated locations for XP_006719496.1
- Conserved Domains (1) summary
-
- pfam04153
Location:259 → 382
- NOT2_3_5; NOT2 / NOT3 / NOT5 family
-
XM_047428885.1 → XP_047284841.1 CCR4-NOT transcription complex subunit 2 isoform X3
-
XM_024448988.2 → XP_024304756.1 CCR4-NOT transcription complex subunit 2 isoform X6
-
XM_047428886.1 → XP_047284842.1 CCR4-NOT transcription complex subunit 2 isoform X4
-
XM_047428884.1 → XP_047284840.1 CCR4-NOT transcription complex subunit 2 isoform X2
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
70222411..70334463
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054372116.1 → XP_054228091.1 CCR4-NOT transcription complex subunit 2 isoform X2
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4
-
XM_054372115.1 → XP_054228090.1 CCR4-NOT transcription complex subunit 2 isoform X1
- UniProtKB/TrEMBL
- B3KTL6, F8VV52
-
XM_054372121.1 → XP_054228096.1 CCR4-NOT transcription complex subunit 2 isoform X8
-
XM_054372119.1 → XP_054228094.1 CCR4-NOT transcription complex subunit 2 isoform X7
-
XM_054372118.1 → XP_054228093.1 CCR4-NOT transcription complex subunit 2 isoform X3
-
XM_054372122.1 → XP_054228097.1 CCR4-NOT transcription complex subunit 2 isoform X6
-
XM_054372120.1 → XP_054228095.1 CCR4-NOT transcription complex subunit 2 isoform X7
-
XM_054372117.1 → XP_054228092.1 CCR4-NOT transcription complex subunit 2 isoform X2
- UniProtKB/TrEMBL
- B3KTL6, F8VUB4