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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012565.1 RefSeqGene
- Range
-
5203..81426
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001410710.1 → NP_001397639.1 septin-6 isoform E
Status: REVIEWED
- Source sequence(s)
-
AC004913, AC005052, AL355348
- Consensus CDS
-
CCDS94661.1
- UniProtKB/TrEMBL
- B1AMS2, Q6NT82
- Related
- ENSP00000346397.3, ENST00000354416.7
-
NM_015129.6 → NP_055944.2 septin-6 isoform B
See identical proteins and their annotated locations for NP_055944.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (II) encodes the longest isoform (B).
- Source sequence(s)
-
AC004913, AC005052, AL355348
- Consensus CDS
-
CCDS14584.1
- UniProtKB/Swiss-Prot
- Q14141, Q5JTK0, Q969W5, Q96A13, Q96GR1, Q96P86, Q96P87
- UniProtKB/TrEMBL
-
Q6NT82
- Related
- ENSP00000341524.5, ENST00000343984.5
- Conserved Domains (1) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
-
NM_145799.4 → NP_665798.1 septin-6 isoform A
See identical proteins and their annotated locations for NP_665798.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (I) contains an additional segment in the 3' coding region, which leads to a frameshift and immediate translation termination, as compared to variant II. The resulting isoform (A) is truncated at the C-terminus, as compared to isoform B.
- Source sequence(s)
-
AC004913, AY005981, AY034177
- Consensus CDS
-
CCDS14585.1
- UniProtKB/TrEMBL
- Q541S4, Q6NT82
- Related
- ENSP00000378108.1, ENST00000394610.7
- Conserved Domains (1) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
-
NM_145800.4 → NP_665799.1 septin-6 isoform A
See identical proteins and their annotated locations for NP_665799.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (III) contains an alternate 3' sequence, as compared to variant II. The resulting isoform (A) is truncated at the C-terminus, as compared to isoform B.
- Source sequence(s)
-
AC004913, AC005052, AL355348
- Consensus CDS
-
CCDS14585.1
- UniProtKB/TrEMBL
- Q541S4, Q6NT82
- Related
- ENSP00000353278.7, ENST00000360156.11
- Conserved Domains (1) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
-
NM_145802.4 → NP_665801.1 septin-6 isoform D
See identical proteins and their annotated locations for NP_665801.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (V) contains an alternate 3' exon, as compared to variant II. It encodes isoform D, that is shorter and has a distinct C-terminus, as compared to isoform B.
- Source sequence(s)
-
AC004913, AC005052, AL355348
- Consensus CDS
-
CCDS14583.1
- UniProtKB/TrEMBL
- Q548C9, Q6NT82
- Related
- ENSP00000346169.4, ENST00000354228.8
- Conserved Domains (1) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
119615724..119693168 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011531317.4 → XP_011529619.1 septin-6 isoform X1
- UniProtKB/TrEMBL
-
Q6NT82
- Conserved Domains (2) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
- COG5019
Location:21 → 373
- CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
-
XM_011531318.4 → XP_011529620.1 septin-6 isoform X3
See identical proteins and their annotated locations for XP_011529620.1
- UniProtKB/TrEMBL
-
Q6NT82
- Conserved Domains (1) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
-
XM_005262400.5 → XP_005262457.1 septin-6 isoform X2
See identical proteins and their annotated locations for XP_005262457.1
- UniProtKB/TrEMBL
-
Q6NT82
- Conserved Domains (2) summary
-
- cd01850
Location:39 → 307
- CDC_Septin; CDC/Septin GTPase family
- COG5019
Location:21 → 373
- CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
-
XM_047441938.1 → XP_047297894.1 septin-6 isoform X4
- Related
- ENSP00000435818.1, ENST00000460411.5
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791817.1 Reference GRCh38.p14 PATCHES
- Range
-
66726..126670 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
117993452..118071836 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054326727.1 → XP_054182702.1 septin-6 isoform X1
- UniProtKB/TrEMBL
-
Q6NT82
-
XM_054326730.1 → XP_054182705.1 septin-6 isoform X5
- UniProtKB/Swiss-Prot
- Q14141, Q5JTK0, Q969W5, Q96A13, Q96GR1, Q96P86, Q96P87
- UniProtKB/TrEMBL
-
Q6NT82
-
XM_054326729.1 → XP_054182704.1 septin-6 isoform X3
- UniProtKB/TrEMBL
-
Q6NT82
-
XM_054326728.1 → XP_054182703.1 septin-6 isoform X2
- UniProtKB/TrEMBL
-
Q6NT82
-
XM_054326731.1 → XP_054182706.1 septin-6 isoform X4