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    Ubqln2 ubiquilin 2 [ Mus musculus (house mouse) ]

    Gene ID: 54609, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ubqln2provided by MGI
    Official Full Name
    ubiquilin 2provided by MGI
    Primary source
    MGI:MGI:1860283
    See related
    Ensembl:ENSMUSG00000050148 AllianceGenome:MGI:1860283
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dsk2; Chap1; Plic2; Plic-2; HRIHFB2157
    Summary
    Predicted to enable identical protein binding activity; molecular condensate scaffold activity; and polyubiquitin modification-dependent protein binding activity. Predicted to be involved in several processes, including negative regulation of receptor-mediated endocytosis; positive regulation of ERAD pathway; and proteolysis involved in protein catabolic process. Predicted to be located in cytoplasm and plasma membrane. Predicted to be active in cytosol. Is expressed in telencephalon. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis and amyotrophic lateral sclerosis type 15. Orthologous to human UBQLN2 (ubiquilin 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See Ubqln2 in Genome Data Viewer
    Location:
    X F3; X 68.46 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (152281228..152284558)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (153498232..153501562)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_48116 Neighboring gene Kruppel-like transcription factor 8 Neighboring gene STARR-seq mESC enhancer starr_48117 Neighboring gene STARR-seq mESC enhancer starr_48118 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_48121 Neighboring gene predicted gene, 39543 Neighboring gene cysteine-rich perinuclear theca 3 Neighboring gene predicted gene, 25793

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables molecular condensate scaffold activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular condensate scaffold activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables polyubiquitin modification-dependent protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in ERAD pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in ERAD pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in ERAD pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in autophagosome assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of G protein-coupled receptor internalization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of G protein-coupled receptor internalization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of clathrin-dependent endocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of clathrin-dependent endocytosis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of ERAD pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of ERAD pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of autophagosome assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of autophagosome assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of macroautophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of macroautophagy ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of macroautophagy ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in autophagosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ubiquilin-2
    Names
    Ubiquitin-related protein
    protein linking IAP with cytoskeleton 2
    ubiquitin-like product Chap1/Dsk2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_018798.2NP_061268.2  ubiquilin-2

      See identical proteins and their annotated locations for NP_061268.2

      Status: VALIDATED

      Source sequence(s)
      BC053022
      Consensus CDS
      CCDS30482.1
      UniProtKB/Swiss-Prot
      B1AY62, Q7TSJ8, Q8VDH9, Q9QZM0
      Related
      ENSMUSP00000056888.9, ENSMUST00000060714.10
      Conserved Domains (4) summary
      smart00727
      Location:396440
      STI1; Heat shock chaperonin-binding motif
      cd01808
      Location:33103
      hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
      smart00213
      Location:33103
      UBQ; Ubiquitin homologues
      cd14399
      Location:595634
      UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      152281228..152284558
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)