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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_172775.2 → NP_766363.2 plexin-B1 precursor
See identical proteins and their annotated locations for NP_766363.2
Status: VALIDATED
- Source sequence(s)
-
AB072381, BC150701, CJ173103, CJ261396
- Consensus CDS
-
CCDS23546.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Related
- ENSMUSP00000071966.7, ENSMUST00000072093.13
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000075.7 Reference GRCm39 C57BL/6J
- Range
-
108922915..108948983
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006512076.5 → XP_006512139.1 plexin-B1 isoform X1
See identical proteins and their annotated locations for XP_006512139.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006512078.3 → XP_006512141.1 plexin-B1 isoform X1
See identical proteins and their annotated locations for XP_006512141.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006512075.4 → XP_006512138.1 plexin-B1 isoform X1
See identical proteins and their annotated locations for XP_006512138.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006512081.2 → XP_006512144.1 plexin-B1 isoform X2
- Conserved Domains (6) summary
-
- smart00423
Location:209 → 256
- PSI; domain found in Plexins, Semaphorins and Integrins
- cd01179
Location:350 → 437
- IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- cd01180
Location:258 → 349
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam08337
Location:736 → 1275
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam18020
Location:109 → 208
- TIG_2; TIG domain found in plexin
- cl15674
Location:440 → 550
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
-
XM_030244345.1 → XP_030100205.1 plexin-B1 isoform X1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006512079.4 → XP_006512142.1 plexin-B1 isoform X1
See identical proteins and their annotated locations for XP_006512142.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_036154913.1 → XP_036010806.1 plexin-B1 isoform X1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006512080.4 → XP_006512143.1 plexin-B1 isoform X1
See identical proteins and their annotated locations for XP_006512143.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_006512077.5 → XP_006512140.1 plexin-B1 isoform X1
See identical proteins and their annotated locations for XP_006512140.1
- UniProtKB/Swiss-Prot
- E9QKS4, Q6ZQC3, Q80ZZ1, Q8CJH3
- UniProtKB/TrEMBL
-
B2RWT9
- Conserved Domains (10) summary
-
- smart00423
Location:641 → 677
- PSI; domain found in Plexins, Semaphorins and Integrins
- PHA03247
Location:713 → 851
- PHA03247; large tegument protein UL36; Provisional
- cd01180
Location:1068 → 1159
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam01437
Location:481 → 527
- PSI; Plexin repeat
- pfam01833
Location:1362 → 1432
- TIG; IPT/TIG domain
- pfam08337
Location:1546 → 2086
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- pfam17960
Location:541 → 627
- TIG_plexin; TIG domain
- pfam18020
Location:919 → 1018
- TIG_2; TIG domain found in plexin
- cl15674
Location:1160 → 1247
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
- cl15693
Location:28 → 480
- Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
-
XM_030244347.1 → XP_030100207.1 plexin-B1 isoform X3
- Conserved Domains (4) summary
-
- cd01179
Location:127 → 214
- IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- cd01180
Location:35 → 126
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam08337
Location:513 → 1053
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- cl15674
Location:217 → 327
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
-
XM_030244346.1 → XP_030100206.1 plexin-B1 isoform X3
- Conserved Domains (4) summary
-
- cd01179
Location:127 → 214
- IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- cd01180
Location:35 → 126
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam08337
Location:513 → 1053
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- cl15674
Location:217 → 327
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
-
XM_036154914.1 → XP_036010807.1 plexin-B1 isoform X3
- Conserved Domains (4) summary
-
- cd01179
Location:127 → 214
- IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- cd01180
Location:35 → 126
- IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
- pfam08337
Location:513 → 1053
- Plexin_cytopl; Plexin cytoplasmic RasGAP domain
- cl15674
Location:217 → 327
- IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...