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    LINC00184 long intergenic non-protein coding RNA 184 [ Homo sapiens (human) ]

    Gene ID: 100302691, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC00184provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 184provided by HGNC
    Primary source
    HGNC:HGNC:37192
    See related
    Ensembl:ENSG00000224939 AllianceGenome:HGNC:37192
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HANC; NCRNA00184
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC00184 in Genome Data Viewer
    Location:
    1q42.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (234629311..234634780)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (234019730..234025200)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (234765057..234770526)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene U8 small nucleolar RNA Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:234735097-234735610 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:234735611-234736124 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1974 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1975 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2760 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1976 Neighboring gene interferon regulatory factor 2 binding protein 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1977 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1978 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:234745399-234746096 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2761 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1981 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2762 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2763 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:234752429-234752929 Neighboring gene Sharpr-MPRA regulatory region 10666 Neighboring gene uncharacterized LOC101927787 Neighboring gene uncharacterized LOC105373207 Neighboring gene uncharacterized LOC124904554 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:234792319-234793518

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Other Names

    • lnc-beta-Catm
    • lncRNA for beta-catenin methylation

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033927.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL160408, BU950959, CK818308
      Related
      ENST00000429269.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      234629311..234634780
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      234019730..234025200
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)