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    LOC101929752 uncharacterized LOC101929752 [ Homo sapiens (human) ]

    Gene ID: 101929752, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC101929752
    Gene description
    uncharacterized LOC101929752
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC101929752 in Genome Data Viewer
    Location:
    2p25.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (11720233..11724223, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (11753377..11757371, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (11860359..11864349, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11809762-11810298 Neighboring gene neurotensin receptor 2 Neighboring gene cyclin dependent kinase 8 pseudogene 1 Neighboring gene uncharacterized LOC100506405 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11822031-11822671 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11828037-11828536 Neighboring gene lipin 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11836720-11837568 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15321 Neighboring gene Sharpr-MPRA regulatory region 9262 Neighboring gene uncharacterized LOC124907735 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:11884925-11885498 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11176 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:11888010-11888681 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15322 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15323 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11177 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15324 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:11900287-11900799 Neighboring gene microRNA 548s

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Homology

    Clone Names

    • AC012456.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187660.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC012456, AC106875

    2. NR_187661.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC012456, AC106875

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      11720233..11724223 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      11753377..11757371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials