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    TDA7 Tda7p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855545, updated on 9-Dec-2024

    Summary

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    Official Symbol
    TDA7
    Official Full Name
    Tda7p
    Primary source
    SGD:S000005120
    Locus tag
    YNL176C
    See related
    AllianceGenome:SGD:S000005120; FungiDB:YNL176C; VEuPathDB:YNL176C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in fungal-type vacuole. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See TDA7 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (305070..306980, complement)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene ribosomal 40S subunit protein S3 Neighboring gene mitochondrial 54S ribosomal protein YmL22 Neighboring gene Nop13p Neighboring gene Mdg1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. New weakly expressed cell cycle-regulated genes in yeast. de Lichtenberg U, et al. Yeast, 2005 Nov. PMID 16278933
    2. Organelle acidification is important for localisation of vacuolar proteins in Saccharomyces cerevisiae. Matsumoto R, et al. Protoplasma, 2013 Dec. PMID 23708375
    3. Ubiquitin-Activated Interaction Traps (UBAITs) identify E3 ligase binding partners. O'Connor HF, et al. EMBO Rep, 2015 Dec. PMID 26508657, Free PMC Article
    4. Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage. Reid RJ, et al. Genome Res, 2011 Mar. PMID 21173034, Free PMC Article
    5. Whi3, a developmental regulator of budding yeast, binds a large set of mRNAs functionally related to the endoplasmic reticulum. Colomina N, et al. J Biol Chem, 2008 Oct 17. PMID 18667435, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in fungal-type vacuole HDA PubMed 
    located_in fungal-type vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuolar membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Tda7p
    NP_014223.2
    • Cell cycle-regulated gene of unknown function; promoter bound by Fkh2p; null mutant is sensitive to expression of the top1-T722A allele; TDA7 has a paralog, YDL211C, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      305070..306980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183014.2 → NP_014223.2  TPA: Tda7p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014223.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A6ZRQ9, B3LP27, B5VQN1, C7GTF0, D6W109, E7KH03, E7QJS8, P53882
      UniProtKB/TrEMBL
      N1NWG3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53882.2

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