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    AY358078 cDNA sequence AY358078 [ Mus musculus (house mouse) ]

    Gene ID: 278676, updated on 27-Nov-2024

    Summary

    Official Symbol
    AY358078provided by MGI
    Official Full Name
    cDNA sequence AY358078provided by MGI
    Primary source
    MGI:MGI:2682312
    See related
    Ensembl:ENSMUSG00000050961 AllianceGenome:MGI:2682312
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See AY358078 in Genome Data Viewer
    Location:
    14 C1- C2; 14 26.67 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (52037503..52063816)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (51800046..51826359)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene angiogenin, ribonuclease A family, member 4 Neighboring gene eosinophil-associated, ribonuclease A family, pseudogene 4 Neighboring gene ubiquitin specific peptidase 7 pseudogene Neighboring gene hematological and neurological expressed 1-like pseudogene 1 Neighboring gene eosinophil-associated, ribonuclease A family, pseudogene 5 Neighboring gene eosinophil-associated, ribonuclease A family, member 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC278676

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_194347.1NP_919328.1  uncharacterized protein LOC278676

      See identical proteins and their annotated locations for NP_919328.1

      Status: PREDICTED

      Source sequence(s)
      AY358078
      Consensus CDS
      CCDS49485.1
      UniProtKB/TrEMBL
      Q6UY53
      Related
      ENSMUSP00000078129.4, ENSMUST00000053821.5
      Conserved Domains (1) summary
      pfam04822
      Location:93170
      Takusan; Takusan

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      52037503..52063816
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)