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    Sult5a1 sulfotransferase family 5A, member 1 [ Mus musculus (house mouse) ]

    Gene ID: 57429, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Sult5a1provided by MGI
    Official Full Name
    sulfotransferase family 5A, member 1provided by MGI
    Primary source
    MGI:MGI:1931463
    See related
    Ensembl:ENSMUSG00000000739 AllianceGenome:MGI:1931463
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sultx1; Sult-x1
    Summary
    Predicted to enable sulfotransferase activity. Predicted to be involved in sulfation. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in liver adult (RPKM 20.6), genital fat pad adult (RPKM 15.1) and 11 other tissues See more
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    Genomic context

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    See Sult5a1 in Genome Data Viewer
    Location:
    8 E1; 8 72.06 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (123869582..123885170, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (123142843..123158914, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13 Neighboring gene microRNA 7079 Neighboring gene copine VII Neighboring gene microRNA 7080 Neighboring gene predicted gene, 57791 Neighboring gene predicted gene 4316

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Human cytosolic sulfotransferase database mining: identification of seven novel genes and pseudogenes. Freimuth RR, et al. Pharmacogenomics J, 2004. PMID 14676822
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in sulfation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    sulfotransferase family 5A, member 1
    Names
    sulfotransferase related gene X1
    sulfotransferase-related protein SULT-X1
    NP_065589.2
    XP_006531293.1
    XP_006531294.3
    XP_006531295.3
    XP_030099560.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020564.3 → NP_065589.2  sulfotransferase family 5A, member 1

      See identical proteins and their annotated locations for NP_065589.2

      Status: VALIDATED

      Source sequence(s)
      CJ065192, CO044978
      Consensus CDS
      CCDS22749.1
      UniProtKB/TrEMBL
      O35402, Q91X36
      Related
      ENSMUSP00000000755.8, ENSMUST00000000755.15
      Conserved Domains (1) summary
      pfam00685
      Location:36 → 283
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      123869582..123885170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531230.5 → XP_006531293.1  sulfotransferase family 5A, member 1 isoform X1

      See identical proteins and their annotated locations for XP_006531293.1

      UniProtKB/TrEMBL
      O35402, Q91X36
      Conserved Domains (1) summary
      pfam00685
      Location:36 → 283
      Sulfotransfer_1; Sulfotransferase domain

    2. XM_030243700.2 → XP_030099560.1  sulfotransferase family 5A, member 1 isoform X4

      UniProtKB/TrEMBL
      Q3UQP7
      Related
      ENSMUSP00000123501.2, ENSMUST00000122819.8
      Conserved Domains (1) summary
      pfam00685
      Location:36 → 171
      Sulfotransfer_1; Sulfotransferase domain

    3. XM_006531231.5 → XP_006531294.3  sulfotransferase family 5A, member 1 isoform X2

      UniProtKB/TrEMBL
      D3Z6D1
      Conserved Domains (1) summary
      pfam00685
      Location:36 → 193
      Sulfotransfer_1; Sulfotransferase domain

    4. XM_006531232.5 → XP_006531295.3  sulfotransferase family 5A, member 1 isoform X3

      UniProtKB/TrEMBL
      D3Z6D1
      Related
      ENSMUSP00000122415.2, ENSMUST00000137998.2
      Conserved Domains (1) summary
      pfam00685
      Location:36 → 193
      Sulfotransfer_1; Sulfotransferase domain

    RNA

    1. XR_003947321.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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