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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_028220.1 RefSeqGene
- Range
-
5109..229418
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_877
mRNA and Protein(s)
-
NM_001025356.3 → NP_001020527.2 anoctamin-6 isoform a
See identical proteins and their annotated locations for NP_001020527.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript and encodes isoform a.
- Source sequence(s)
-
AA332109, AK126409, AL833405, BC098410
- Consensus CDS
-
CCDS31782.1
- UniProtKB/Swiss-Prot
- A6NNM6, B9EGG0, E7ENK4, E9PB30, E9PCT2, Q4KMQ2, Q8N3Q2
- UniProtKB/TrEMBL
-
A0A7P0TAF4
- Related
- ENSP00000320087.8, ENST00000320560.13
- Conserved Domains (2) summary
-
- pfam04547
Location:287 → 871
- Anoctamin; Calcium-activated chloride channel
- pfam16178
Location:61 → 284
- Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
-
NM_001142678.2 → NP_001136150.1 anoctamin-6 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate 5' terminal exon compared to variant 1, resulting in an isoform (b) with a shorter and distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AA332109, AL832340, BC063576, BC098410
- Consensus CDS
-
CCDS44866.1
- UniProtKB/TrEMBL
-
A0A7P0TAF4
- Related
- ENSP00000413137.2, ENST00000441606.2
- Conserved Domains (2) summary
-
- pfam04547
Location:269 → 853
- Anoctamin; Calcium-activated chloride channel
- pfam16178
Location:43 → 266
- Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
-
NM_001142679.2 → NP_001136151.1 anoctamin-6 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate 3' terminal exon compared to variant 1, resulting in an isoform (c) with a longer and distinct C-terminus compared to isoform a. Variants 3 and 4 encode the same isoform.
- Source sequence(s)
-
AK310641, BC098410
- Consensus CDS
-
CCDS44865.1
- UniProtKB/TrEMBL
-
B4DZA5
- Related
- ENSP00000391417.2, ENST00000425752.6
- Conserved Domains (2) summary
-
- pfam04547
Location:287 → 761
- Anoctamin; Calcium-activated chloride channel
- pfam16178
Location:61 → 284
- Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
-
NM_001204803.2 → NP_001191732.1 anoctamin-6 isoform d
See identical proteins and their annotated locations for NP_001191732.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) contains an additional in-frame coding exon compared to variant 1, resulting in a longer isoform (d) with an internal protein segment not found in isoform a.
- Source sequence(s)
-
AA332109, AK126409, BC098410, BC136445
- Consensus CDS
-
CCDS55819.1
- UniProtKB/TrEMBL
-
A0A7P0TAF4
- Related
- ENSP00000409126.3, ENST00000423947.7
- Conserved Domains (2) summary
-
- pfam04547
Location:308 → 891
- Anoctamin; Calcium-activated chloride channel
- pfam16178
Location:82 → 305
- Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
-
NM_001410973.1 → NP_001397902.1 anoctamin-6 isoform e
Status: REVIEWED
- Source sequence(s)
-
AC009248, AC009778, AC063924
- Consensus CDS
-
CCDS91686.1
- UniProtKB/TrEMBL
- A0A7P0TAF4, A0A7P0TBC5
- Related
- ENSP00000506600.1, ENST00000679426.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
45216095..45440404
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005268707.5 → XP_005268764.1 anoctamin-6 isoform X1
- UniProtKB/TrEMBL
-
A0A7P0TAF4
- Related
- ENSP00000506683.1, ENST00000681817.1
- Conserved Domains (2) summary
-
- pfam04547
Location:254 → 838
- Anoctamin; Calcium-activated chloride channel
- pfam16178
Location:28 → 251
- Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
45174737..45399096
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054371389.1 → XP_054227364.1 anoctamin-6 isoform X1
- UniProtKB/TrEMBL
-
A0A7P0TAF4
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001142680.1: Suppressed sequence
- Description
- NM_001142680.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.