U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GPR160 G protein-coupled receptor 160 [ Homo sapiens (human) ]

    Gene ID: 26996, updated on 9-Dec-2024

    Summary

    Official Symbol
    GPR160provided by HGNC
    Official Full Name
    G protein-coupled receptor 160provided by HGNC
    Primary source
    HGNC:HGNC:23693
    See related
    Ensembl:ENSG00000173890 AllianceGenome:HGNC:23693
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GPCR1; GPCR150
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Located in plasma membrane. Part of receptor complex. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in small intestine (RPKM 20.7), duodenum (RPKM 16.2) and 15 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See GPR160 in Genome Data Viewer
    Location:
    3q26.2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (170037995..170085392)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (172822662..172870058)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (169755783..169803180)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20789 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20790 Neighboring gene FHL1 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20791 Neighboring gene NANOG hESC enhancer GRCh37_chr3:169686270-169686802 Neighboring gene SEC62 homolog, preprotein translocation factor Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20792 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14877 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14878 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr3:169756663-169757162 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20793 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:169763504-169764004 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20794 Neighboring gene uncharacterized LOC124909455 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20795 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20796 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20797 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:169773599-169774098 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:169779520-169780041 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:169780042-169780562 Neighboring gene MPRA-validated peak4913 silencer Neighboring gene RNA, U4 small nuclear 38, pseudogene Neighboring gene uncharacterized LOC124909456 Neighboring gene KMT5A pseudogene 3 Neighboring gene MPRA-validated peak4915 silencer Neighboring gene uncharacterized LOC105374209 Neighboring gene polyhomeotic homolog 3 Neighboring gene RNA, U6 small nuclear 315, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
     
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    probable G-protein coupled receptor 160
    Names
    G-protein coupled receptor GPCR1
    hGPCR1
    putative G protein-coupled receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_014373.3NP_055188.1  probable G-protein coupled receptor 160

      See identical proteins and their annotated locations for NP_055188.1

      Status: VALIDATED

      Source sequence(s)
      AI560646, BC000181, BX400356, BX414005
      Consensus CDS
      CCDS3211.1
      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
      Related
      ENSP00000348161.5, ENST00000355897.10

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      170037995..170085392
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024453450.2XP_024309218.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    2. XM_024453449.2XP_024309217.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    3. XM_005247346.5XP_005247403.1  probable G-protein coupled receptor 160 isoform X1

      See identical proteins and their annotated locations for XP_005247403.1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    4. XM_017006161.3XP_016861650.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    5. XM_047447959.1XP_047303915.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    6. XM_005247347.5XP_005247404.1  probable G-protein coupled receptor 160 isoform X1

      See identical proteins and their annotated locations for XP_005247404.1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      172822662..172870058
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054346156.1XP_054202131.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    2. XM_054346155.1XP_054202130.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    3. XM_054346157.1XP_054202132.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42
    4. XM_054346158.1XP_054202133.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      D3DNQ2, Q9UJ42