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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_042789.1 RefSeqGene
- Range
-
4054..177748
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001304420.3 → NP_001291349.1 sarcolemmal membrane-associated protein isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform a.
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS77757.1
- UniProtKB/Swiss-Prot
- Q14BN4, Q14C95, Q6AI54, Q6UXC9, Q6ZVQ8, Q8NCW9, Q9H297, Q9HCH1, Q9Y681
- UniProtKB/TrEMBL
-
A0A994J562
- Related
- ENSP00000499241.1, ENST00000659705.1
- Conserved Domains (4) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 795
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:601 → 679
- DUF342; Protein of unknown function (DUF342)
-
NM_001304421.2 → NP_001291350.1 sarcolemmal membrane-associated protein isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks two alternate in-frame exons in the central coding region compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AC099777, AW292835, AY358410, BC114627, BC115701, BF508478, BQ022030
- Consensus CDS
-
CCDS77758.1
- UniProtKB/TrEMBL
-
A0A994J562
- Related
- ENSP00000412945.2, ENST00000449503.6
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 757
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001304422.3 → NP_001291351.1 sarcolemmal membrane-associated protein isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream start codon and result in an isoform (d) with a shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AC099777, AK304493, BQ022030
- UniProtKB/TrEMBL
- B7Z964, H7BZK0
- Conserved Domains (1) summary
-
- cl19219
Location:135 → 213
- DUF342; Protein of unknown function (DUF342)
-
NM_001304423.3 → NP_001291352.1 sarcolemmal membrane-associated protein isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) represents use of an alternate promoter, and lacks two alternate in-frame exons in the 3' coding region, compared to variant 1 compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at a downstream start codon, compared to variant 1. The encoded isoform (e) is shorter than isoform a.
- Source sequence(s)
-
AC099777, AK300106, BQ022030
- UniProtKB/TrEMBL
-
B7Z6C7
- Conserved Domains (1) summary
-
- COG1196
Location:4 → 263
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001311178.2 → NP_001298107.1 sarcolemmal membrane-associated protein isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) represents use of an alternate promoter, differs in the 5' UTR, and has multiple coding region differences that result in use of a downstream translation initiation codon and a novel 3' coding region compared to variant 1. It encodes isoform f, which has a shorter N-terminus and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AA625308, AB046821, AC099777, AF304450, AL834538, BF508478, DB100357
- Consensus CDS
-
CCDS93301.1
- UniProtKB/TrEMBL
-
H7BZK0
- Related
- ENSP00000418218.2, ENST00000494088.6
- Conserved Domains (1) summary
-
- cl19219
Location:135 → 213
- DUF342; Protein of unknown function (DUF342)
-
NM_001311179.2 → NP_001298108.1 sarcolemmal membrane-associated protein isoform g
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) represents use of an alternate promoter, differs in the 5' UTR, uses a downstream translation initiation codon, and has a novel 3'-terminal exon compared to variant 1. It encodes isoform g, which has a shorter N-terminus and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AC099777, BQ771573, CR627321, DB100357
- UniProtKB/Swiss-Prot
-
Q14BN4
- Conserved Domains (1) summary
-
- cl19219
Location:94 → 172
- DUF342; Protein of unknown function (DUF342)
-
NM_001377538.1 → NP_001364467.1 sarcolemmal membrane-associated protein isoform h
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS93295.1
- UniProtKB/TrEMBL
- A0A994J5K5, A0A994J7V1
- Related
- ENSP00000516144.1, ENST00000705628.1
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:163 → 819
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377539.1 → NP_001364468.1 sarcolemmal membrane-associated protein isoform i
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A994J7V1
- Related
- ENSP00000516151.1, ENST00000705652.1
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:163 → 812
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377540.1 → NP_001364469.1 sarcolemmal membrane-associated protein isoform j
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS93296.1
- UniProtKB/TrEMBL
- A0A590UJK3, A0A994J7V1
- Related
- ENSP00000499458.1, ENST00000671191.1
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:163 → 812
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377541.1 → NP_001364470.1 sarcolemmal membrane-associated protein isoform k
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A994J4X9
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 795
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377542.1 → NP_001364471.1 sarcolemmal membrane-associated protein isoform q
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 795
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377545.1 → NP_001364474.1 sarcolemmal membrane-associated protein isoform l
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:163 → 791
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377549.1 → NP_001364478.1 sarcolemmal membrane-associated protein isoform n
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 778
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377551.1 → NP_001364480.1 sarcolemmal membrane-associated protein isoform aa
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS93298.1
- UniProtKB/TrEMBL
- A0A590UJS6, A0A994J558, A0A994J562
- Related
- ENSP00000499553.2, ENST00000670768.2
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 774
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377552.1 → NP_001364481.1 sarcolemmal membrane-associated protein isoform o
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS93297.1
- UniProtKB/TrEMBL
- A0A994J4X9, H7C3M8
- Related
- ENSP00000412829.3, ENST00000417128.7
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 774
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377555.1 → NP_001364484.1 sarcolemmal membrane-associated protein isoform p
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 771
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377557.1 → NP_001364486.1 sarcolemmal membrane-associated protein isoform c
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS77758.1
- UniProtKB/TrEMBL
-
A0A994J562
- Related
- ENSP00000516150.1, ENST00000705651.1
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 757
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377559.1 → NP_001364488.1 sarcolemmal membrane-associated protein isoform r
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A994J4X9
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 757
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377562.1 → NP_001364491.1 sarcolemmal membrane-associated protein isoform bb
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A994J4X9
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 754
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377921.1 → NP_001364850.1 sarcolemmal membrane-associated protein isoform s
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS93299.1
- UniProtKB/TrEMBL
- A0A590UJP6, H7C5G9
- Related
- ENSP00000419849.2, ENST00000465203.6
- Conserved Domains (3) summary
-
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:156 → 754
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377922.1 → NP_001364851.1 sarcolemmal membrane-associated protein isoform t
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Related
- ENSP00000499520.2, ENST00000475055.2
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 750
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377923.1 → NP_001364852.1 sarcolemmal membrane-associated protein isoform u
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (3) summary
-
- COG1196
Location:161 → 737
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377924.1 → NP_001364853.1 sarcolemmal membrane-associated protein isoform v
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (3) summary
-
- COG0419
Location:167 → 734
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377925.1 → NP_001364854.1 sarcolemmal membrane-associated protein isoform w
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS93300.1
- UniProtKB/TrEMBL
- A0A5F9VB99, A0A994J4X9
- Related
- ENSP00000398661.2, ENST00000428312.6
- Conserved Domains (3) summary
-
- COG0419
Location:167 → 717
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd21911
Location:163 → 225
- CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
-
NM_001377926.1 → NP_001364855.1 sarcolemmal membrane-associated protein isoform x
Status: REVIEWED
- Source sequence(s)
-
AC099777
- UniProtKB/TrEMBL
-
B7Z6C7
- Conserved Domains (1) summary
-
- COG1196
Location:20 → 288
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001377927.1 → NP_001364856.1 sarcolemmal membrane-associated protein isoform y
Status: REVIEWED
- Source sequence(s)
-
AC099777
- UniProtKB/TrEMBL
- B7Z6C7, B7Z863
- Conserved Domains (1) summary
-
- COG1196
Location:20 → 288
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001377928.1 → NP_001364857.1 sarcolemmal membrane-associated protein isoform z
Status: REVIEWED
- Source sequence(s)
-
AC099777
- Conserved Domains (1) summary
-
- COG1196
Location:3 → 190
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_007159.5 → NP_009090.2 sarcolemmal membrane-associated protein isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the central coding region compared to variant 1. The encoded isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AC099777, AC114480
- Consensus CDS
-
CCDS33774.1
- UniProtKB/TrEMBL
-
A0A994J558
- Related
- ENSP00000295951.3, ENST00000295951.7
- Conserved Domains (5) summary
-
- COG1196
Location:161 → 778
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cl19219
Location:584 → 662
- DUF342; Protein of unknown function (DUF342)
- cl23720
Location:477 → 572
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
RNA
-
NR_165328.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC099777, AC114480
- Related
-
ENST00000659926.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
57756309..57930013
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005265456.5 → XP_005265513.1 sarcolemmal membrane-associated protein isoform X1
- UniProtKB/TrEMBL
-
A0A994J7V1
- Conserved Domains (5) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:165 → 814
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:620 → 698
- DUF342; Protein of unknown function (DUF342)
- cl23720
Location:513 → 608
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_005265468.5 → XP_005265525.1 sarcolemmal membrane-associated protein isoform X12
- UniProtKB/TrEMBL
-
A0A994J7V1
- Conserved Domains (4) summary
-
- COG1196
Location:163 → 773
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cl19219
Location:579 → 657
- DUF342; Protein of unknown function (DUF342)
-
XM_005265462.5 → XP_005265519.1 sarcolemmal membrane-associated protein isoform X6
- UniProtKB/TrEMBL
-
A0A994J7V1
- Conserved Domains (4) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:165 → 793
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:599 → 677
- DUF342; Protein of unknown function (DUF342)
-
XM_005265459.5 → XP_005265516.1 sarcolemmal membrane-associated protein isoform X3
- UniProtKB/TrEMBL
-
A0A994J562
- Conserved Domains (4) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:158 → 797
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:603 → 681
- DUF342; Protein of unknown function (DUF342)
-
XM_017007159.3 → XP_016862648.1 sarcolemmal membrane-associated protein isoform X16
- UniProtKB/TrEMBL
-
A0A994J4X9
-
XM_005265467.5 → XP_005265524.1 sarcolemmal membrane-associated protein isoform X9
- UniProtKB/TrEMBL
- A0A994J558, A0A994J562
- Conserved Domains (4) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:158 → 776
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:582 → 660
- DUF342; Protein of unknown function (DUF342)
-
XM_005265472.5 → XP_005265529.1 sarcolemmal membrane-associated protein isoform X19
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (4) summary
-
- COG0419
Location:169 → 736
- SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cl19219
Location:541 → 619
- DUF342; Protein of unknown function (DUF342)
-
XM_005265460.5 → XP_005265517.1 sarcolemmal membrane-associated protein isoform X4
- UniProtKB/TrEMBL
-
A0A994J558
- Conserved Domains (5) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:158 → 797
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:603 → 681
- DUF342; Protein of unknown function (DUF342)
- cl23720
Location:496 → 591
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_011534103.3 → XP_011532405.1 sarcolemmal membrane-associated protein isoform X10
- UniProtKB/TrEMBL
-
A0A994J558
- Conserved Domains (5) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- TIGR02168
Location:165 → 776
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cl19219
Location:582 → 660
- DUF342; Protein of unknown function (DUF342)
- cl23720
Location:475 → 570
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_005265465.5 → XP_005265522.1 sarcolemmal membrane-associated protein isoform X8
- UniProtKB/TrEMBL
-
A0A994J558
- Conserved Domains (5) summary
-
- COG1196
Location:163 → 780
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cl19219
Location:586 → 664
- DUF342; Protein of unknown function (DUF342)
- cl23720
Location:479 → 574
- RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
-
XM_005265470.5 → XP_005265527.1 sarcolemmal membrane-associated protein isoform X14
- UniProtKB/TrEMBL
-
A0A994J562
- Conserved Domains (4) summary
-
- COG1196
Location:163 → 759
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cl19219
Location:565 → 643
- DUF342; Protein of unknown function (DUF342)
-
XM_011534105.3 → XP_011532407.1 sarcolemmal membrane-associated protein isoform X21
- UniProtKB/TrEMBL
-
A0A994J4X9
- Conserved Domains (4) summary
-
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- pfam00038
Location:295 → 616
- Filament; Intermediate filament protein
- cl19219
Location:524 → 602
- DUF342; Protein of unknown function (DUF342)
-
XM_017007155.3 → XP_016862644.1 sarcolemmal membrane-associated protein isoform X13
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_047448889.1 → XP_047304845.1 sarcolemmal membrane-associated protein isoform X7
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_017007161.3 → XP_016862650.1 sarcolemmal membrane-associated protein isoform X17
- UniProtKB/TrEMBL
-
A0A994J5K8
-
XM_047448892.1 → XP_047304848.1 sarcolemmal membrane-associated protein isoform X20
- UniProtKB/TrEMBL
-
A0A590UJP6
-
XM_017007147.3 → XP_016862636.1 sarcolemmal membrane-associated protein isoform X5
- UniProtKB/TrEMBL
-
A0A994J558
-
XM_047448890.1 → XP_047304846.1 sarcolemmal membrane-associated protein isoform X11
- UniProtKB/TrEMBL
-
A0A994J558
- Related
- ENSP00000516145.1, ENST00000705629.1
-
XM_006713326.4 → XP_006713389.1 sarcolemmal membrane-associated protein isoform X18
- UniProtKB/TrEMBL
-
A0A590UJP6
- Conserved Domains (4) summary
-
- COG1196
Location:161 → 737
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1716
Location:46 → 109
- FHA; Forkhead associated (FHA) domain, binds pSer, pThr, pTyr [Signal transduction mechanisms]
- cd00060
Location:14 → 108
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cl19219
Location:543 → 621
- DUF342; Protein of unknown function (DUF342)
-
XM_047448893.1 → XP_047304849.1 sarcolemmal membrane-associated protein isoform X22
- UniProtKB/TrEMBL
-
A0A994J5K8
- Related
- ENSP00000516149.1, ENST00000705650.1
-
XM_047448888.1 → XP_047304844.1 sarcolemmal membrane-associated protein isoform X2
- UniProtKB/TrEMBL
-
A0A994J7V1
- Related
- ENSP00000391886.2, ENST00000438794.6
-
XM_047448891.1 → XP_047304847.1 sarcolemmal membrane-associated protein isoform X15
- UniProtKB/TrEMBL
-
A0A994J4X9
- Related
- ENSP00000516147.1, ENST00000705648.1
-
XM_017007169.3 → XP_016862658.1 sarcolemmal membrane-associated protein isoform X24
- UniProtKB/TrEMBL
-
A0A590UJU9
- Related
- ENSP00000516148.1, ENST00000705649.1
-
XM_047448895.1 → XP_047304851.1 sarcolemmal membrane-associated protein isoform X25
- UniProtKB/TrEMBL
-
A0A590UJ16
-
XM_047448896.1 → XP_047304852.1 sarcolemmal membrane-associated protein isoform X26
- UniProtKB/TrEMBL
-
A0A590UJ16
- Related
- ENSP00000373224.3, ENST00000383718.7
-
XM_047448894.1 → XP_047304850.1 sarcolemmal membrane-associated protein isoform X23
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_011534106.3 → XP_011532408.1 sarcolemmal membrane-associated protein isoform X27
- UniProtKB/TrEMBL
- B7Z964, H7BZK0
- Conserved Domains (1) summary
-
- cl19219
Location:135 → 213
- DUF342; Protein of unknown function (DUF342)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
57796684..57970383
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054347800.1 → XP_054203775.1 sarcolemmal membrane-associated protein isoform X1
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347811.1 → XP_054203786.1 sarcolemmal membrane-associated protein isoform X12
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347805.1 → XP_054203780.1 sarcolemmal membrane-associated protein isoform X6
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347802.1 → XP_054203777.1 sarcolemmal membrane-associated protein isoform X3
- UniProtKB/TrEMBL
-
A0A994J562
-
XM_054347815.1 → XP_054203790.1 sarcolemmal membrane-associated protein isoform X16
- UniProtKB/TrEMBL
-
A0A994J4X9
-
XM_054347808.1 → XP_054203783.1 sarcolemmal membrane-associated protein isoform X9
- UniProtKB/TrEMBL
- A0A994J558, A0A994J562
-
XM_054347818.1 → XP_054203793.1 sarcolemmal membrane-associated protein isoform X19
- UniProtKB/TrEMBL
-
A0A590UJP6
-
XM_054347803.1 → XP_054203778.1 sarcolemmal membrane-associated protein isoform X4
- UniProtKB/TrEMBL
-
A0A994J558
-
XM_054347809.1 → XP_054203784.1 sarcolemmal membrane-associated protein isoform X10
- UniProtKB/TrEMBL
-
A0A994J558
-
XM_054347807.1 → XP_054203782.1 sarcolemmal membrane-associated protein isoform X8
- UniProtKB/TrEMBL
-
A0A994J558
-
XM_054347813.1 → XP_054203788.1 sarcolemmal membrane-associated protein isoform X14
- UniProtKB/TrEMBL
-
A0A994J562
-
XM_054347820.1 → XP_054203795.1 sarcolemmal membrane-associated protein isoform X21
- UniProtKB/TrEMBL
-
A0A994J4X9
-
XM_054347812.1 → XP_054203787.1 sarcolemmal membrane-associated protein isoform X13
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347806.1 → XP_054203781.1 sarcolemmal membrane-associated protein isoform X7
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347816.1 → XP_054203791.1 sarcolemmal membrane-associated protein isoform X17
- UniProtKB/TrEMBL
-
A0A994J5K8
-
XM_054347819.1 → XP_054203794.1 sarcolemmal membrane-associated protein isoform X20
- UniProtKB/TrEMBL
-
A0A590UJP6
-
XM_054347804.1 → XP_054203779.1 sarcolemmal membrane-associated protein isoform X5
- UniProtKB/TrEMBL
-
A0A994J558
-
XM_054347810.1 → XP_054203785.1 sarcolemmal membrane-associated protein isoform X11
- UniProtKB/TrEMBL
-
A0A994J558
-
XM_054347817.1 → XP_054203792.1 sarcolemmal membrane-associated protein isoform X18
- UniProtKB/TrEMBL
-
A0A590UJP6
-
XM_054347821.1 → XP_054203796.1 sarcolemmal membrane-associated protein isoform X22
- UniProtKB/TrEMBL
-
A0A994J5K8
-
XM_054347801.1 → XP_054203776.1 sarcolemmal membrane-associated protein isoform X2
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347814.1 → XP_054203789.1 sarcolemmal membrane-associated protein isoform X15
- UniProtKB/TrEMBL
-
A0A994J4X9
-
XM_054347823.1 → XP_054203798.1 sarcolemmal membrane-associated protein isoform X24
- UniProtKB/TrEMBL
-
A0A590UJU9
-
XM_054347824.1 → XP_054203799.1 sarcolemmal membrane-associated protein isoform X25
- UniProtKB/TrEMBL
-
A0A590UJ16
-
XM_054347825.1 → XP_054203800.1 sarcolemmal membrane-associated protein isoform X26
- UniProtKB/TrEMBL
-
A0A590UJ16
-
XM_054347822.1 → XP_054203797.1 sarcolemmal membrane-associated protein isoform X23
- UniProtKB/TrEMBL
-
A0A994J7V1
-
XM_054347826.1 → XP_054203801.1 sarcolemmal membrane-associated protein isoform X27
- UniProtKB/TrEMBL
- B7Z964, H7BZK0